BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021820 (752 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 29 0.030 AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 25 0.65 EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 24 1.5 S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 23 2.0 DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 23 2.0 AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 21 8.0 AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 8.0 >EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglucosaminidase NAG3 protein. Length = 582 Score = 29.5 bits (63), Expect = 0.030 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -3 Query: 258 WKYQSRASRNRLHI*LRQSLKTCILLC*GP*PWPNPSRLRLGLRSS 121 WK +++ L SL TC +LC P WP P ++L R S Sbjct: 46 WKCENQKCVKYLVEDEETSLATCNMLCSEPAIWPKPVHIKLTNRES 91 >AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase protein. Length = 580 Score = 25.0 bits (52), Expect = 0.65 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = -2 Query: 433 DADNFRTLQLPRDVGHYVHSISTTDTNTQSTKATS 329 D + LP+ + YVH I T KATS Sbjct: 477 DVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATS 511 >EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglucosaminidase FDL protein. Length = 630 Score = 23.8 bits (49), Expect = 1.5 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 204 SLKTCILLC*GP*PWPNPS 148 SL TC +LC WP P+ Sbjct: 78 SLSTCSMLCGSTQLWPQPT 96 >S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium castaneum homeodomainprotein mRNA, complete cds. ). Length = 327 Score = 23.4 bits (48), Expect = 2.0 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 544 PGVDHISCTGMATICNMGAE 603 P +DH SC+ T+ ++G E Sbjct: 12 PNIDHNSCSSDDTVLSVGNE 31 >DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 protein. Length = 366 Score = 23.4 bits (48), Expect = 2.0 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = +1 Query: 595 GAEIGATTSVFPYNSRMEAYLKSTGRHDIAATANS 699 GA T P+ YL+ST HD+ A A + Sbjct: 236 GASASKVTLSVPFYGH-SWYLQSTSNHDVGAPATT 269 >AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like protein protein. Length = 242 Score = 21.4 bits (43), Expect = 8.0 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 Query: 412 LQLPRDVGHYVHSISTTDTN 353 LQ PR VG Y +TD N Sbjct: 1 LQYPRSVGVYGAPYPSTDQN 20 >AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription factor protein. Length = 441 Score = 21.4 bits (43), Expect = 8.0 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -1 Query: 557 WSTPGPWYSTMAPV 516 +S PGP YST + V Sbjct: 297 YSAPGPTYSTWSTV 310 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 186,131 Number of Sequences: 336 Number of extensions: 4228 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 20131186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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