Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021819
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16II1 Cluster: Tata-box binding protein; n=2; Culicida... 95 1e-18
UniRef50_UPI00015B4A38 Cluster: PREDICTED: similar to tata-box b... 87 4e-16
UniRef50_Q07DP5 Cluster: TRF2; n=16; Coelomata|Rep: TRF2 - Droso... 80 6e-14
UniRef50_UPI00005882B9 Cluster: PREDICTED: similar to ENSANGP000... 66 6e-10
UniRef50_UPI0000DA1BDD Cluster: PREDICTED: similar to TATA box-b... 64 3e-09
UniRef50_P62380 Cluster: TATA box-binding protein-like protein 1... 64 3e-09
UniRef50_P29037 Cluster: TATA-box-binding protein; n=168; Eukary... 59 1e-07
UniRef50_P20226 Cluster: TATA-box-binding protein; n=13; Bilater... 59 1e-07
UniRef50_P20227 Cluster: TATA-box-binding protein; n=7; Eukaryot... 58 2e-07
UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea mays... 58 2e-07
UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox c... 56 1e-06
UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, wh... 55 2e-06
UniRef50_Q9XZQ7 Cluster: TBP-like factor; n=3; Caenorhabditis|Re... 52 1e-05
UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1; ... 50 8e-05
UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1; Ostreoco... 48 2e-04
UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep: T... 47 4e-04
UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistos... 44 0.003
UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeb... 44 0.004
UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza sa... 41 0.006
UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba hist... 43 0.007
UniRef50_Q9XZP5 Cluster: TBP-like factor; n=1; Brugia malayi|Rep... 41 0.027
UniRef50_Q4MYF6 Cluster: Putative uncharacterized protein; n=4; ... 37 0.44
UniRef50_Q7RRN4 Cluster: TATA element modulatory factor; n=5; Pl... 36 1.0
UniRef50_Q4X631 Cluster: Transcription initiation TFIID-like, pu... 36 1.0
UniRef50_A5K0W3 Cluster: Transcription initiation TFIID-like, pu... 36 1.3
UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3; C... 34 3.1
UniRef50_Q1JTB3 Cluster: Putative uncharacterized protein precur... 34 3.1
UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6; Thermoco... 34 3.1
UniRef50_A6WIS4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q54J79 Cluster: Leucine-rich repeat-containing protein;... 34 4.1
UniRef50_Q6FMY4 Cluster: Similarities with sp|P32338 Saccharomyc... 34 4.1
UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15; Coeloma... 33 5.4
UniRef50_A0RWZ0 Cluster: TATA-box binding protein (TBP), compone... 33 5.4
UniRef50_A7RUE6 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.5
>UniRef50_Q16II1 Cluster: Tata-box binding protein; n=2;
Culicidae|Rep: Tata-box binding protein - Aedes aegypti
(Yellowfever mosquito)
Length = 584
Score = 95.5 bits (227), Expect = 1e-18
Identities = 53/125 (42%), Positives = 66/125 (52%)
Frame = +3
Query: 348 EEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMKXXXXXXXXXFG 527
E+E PEIDI+INNVVCSFSV+CHLNLR I L G NVEFRRENGMVTMK
Sbjct: 280 EQEAEPEIDIVINNVVCSFSVRCHLNLRDIALKGFNVEFRRENGMVTMKLRRPYTTASIW 339
Query: 528 RQDA*RARAPPVKIKRRLLLDVMHAPYRNSALKCASATFV*SMY*ETCRMPFGIRIISFS 707
+ + ++ + F TC MP+GI I++FS
Sbjct: 340 SSGKITCTGATSEDQAKVAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPWGIMIVNFS 399
Query: 708 KKYKE 722
+KYK+
Sbjct: 400 EKYKK 404
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTASIWSSG++TCTGATSEDQAK+AARRY+R LQKLGF
Sbjct: 334 TTASIWSSGKITCTGATSEDQAKVAARRYSRCLQKLGF 371
>UniRef50_UPI00015B4A38 Cluster: PREDICTED: similar to tata-box
binding protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to tata-box binding protein - Nasonia
vitripennis
Length = 283
Score = 87.0 bits (206), Expect = 4e-16
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Frame = +3
Query: 333 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTM---KXXX 503
+ +D EE PE+DI+I+NVVCSFSV+CHLNLR+I LNG NVE+RRENG+V M K
Sbjct: 47 ESCLDNAEEKPELDIIISNVVCSFSVRCHLNLREIALNGSNVEYRRENGLVRMRLRKPCT 106
Query: 504 XXXXXXFGRQDA*RARA--PPVKIKRRLLLDVMHAPYRNSALKCASATFV*SMY*ETCRM 677
G+ A + K RR + +R ++ + V + TC M
Sbjct: 107 LASISSSGKVTCTGATSEEEAKKAARRCARSLQKLGFR---VRFNNYRIVNVL--GTCTM 161
Query: 678 PFGIRIISFSKKYKE 722
P+ I+I SFS YK+
Sbjct: 162 PWAIKITSFSTHYKD 176
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
T ASI SSG+VTCTGATSE++AK AARR AR+LQKLGF
Sbjct: 106 TLASISSSGKVTCTGATSEEEAKKAARRCARSLQKLGF 143
>UniRef50_Q07DP5 Cluster: TRF2; n=16; Coelomata|Rep: TRF2 - Drosophila
melanogaster (Fruit fly)
Length = 1715
Score = 79.8 bits (188), Expect = 6e-14
Identities = 55/137 (40%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Frame = +3
Query: 333 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMKXXXXXX 512
QP D E E +DI+INNVVCSFSV CHL LR+I L G NVE+RRENGMVTMK
Sbjct: 1274 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVEYRRENGMVTMKLRHPYT 1330
Query: 513 XXXF---GRQDA*RARAPPV-KIKRR---LLLDVMHAPYRNSALKCASATFV*SMY*ETC 671
GR A + + K+ R L + P R + + TC
Sbjct: 1331 TASIWSSGRITCTGATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVL-------GTC 1383
Query: 672 RMPFGIRIISFSKKYKE 722
MP+ I+I++FS++++E
Sbjct: 1384 SMPWAIKIVNFSERHRE 1400
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTASIWSSGR+TCTGATSE AK+AARRYAR L KLGF
Sbjct: 1330 TTASIWSSGRITCTGATSESMAKVAARRYARCLGKLGF 1367
>UniRef50_UPI00005882B9 Cluster: PREDICTED: similar to
ENSANGP00000019042; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000019042
- Strongylocentrotus purpuratus
Length = 325
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +3
Query: 345 DEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
D P +DI INNVVC+F V+CHLNLR+I G NVE+RRE G V M+
Sbjct: 90 DANTNEPSVDIYINNVVCAFGVRCHLNLRRIGQYGSNVEYRREYGKVNMR 139
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TA+IWSSG++T TG SE+ AK ARR ARALQKLGF
Sbjct: 146 TATIWSSGKITITGNDSEEHAKKNARRCARALQKLGF 182
>UniRef50_UPI0000DA1BDD Cluster: PREDICTED: similar to TATA
box-binding protein-like protein 1 (TBP-like protein 1)
(TATA box-binding protein-related factor 2) (TBP-related
factor 2) (21-kDa TBP-like protein); n=2; Rattus
norvegicus|Rep: PREDICTED: similar to TATA box-binding
protein-like protein 1 (TBP-like protein 1) (TATA
box-binding protein-related factor 2) (TBP-related
factor 2) (21-kDa TBP-like protein) - Rattus norvegicus
Length = 363
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 200 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 237
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 411 KCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+CHLNLR+I L G NV ++R+ G V MK
Sbjct: 166 RCHLNLRKIALEGANVIYKRDVGKVLMK 193
>UniRef50_P62380 Cluster: TATA box-binding protein-like protein 1;
n=23; Tetrapoda|Rep: TATA box-binding protein-like
protein 1 - Homo sapiens (Human)
Length = 186
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 7e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>UniRef50_P29037 Cluster: TATA-box-binding protein; n=168;
Eukaryota|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 316
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 186 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 223
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 112 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 167
Query: 459 EF 464
E+
Sbjct: 168 EY 169
>UniRef50_P20226 Cluster: TATA-box-binding protein; n=13;
Bilateria|Rep: TATA-box-binding protein - Homo sapiens
(Human)
Length = 339
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 246
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>UniRef50_P20227 Cluster: TATA-box-binding protein; n=7;
Eukaryota|Rep: TATA-box-binding protein - Drosophila
melanogaster (Fruit fly)
Length = 353
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SED +++AAR+YAR +QKLGF
Sbjct: 223 TTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGF 260
>UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea
mays|Rep: TATA-box-binding protein - Zea mays (Maize)
Length = 392
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I++SG++ CTGA SE Q+K+AAR+YAR +QKLGF
Sbjct: 216 TTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 253
>UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox
carteri f. nagariensis|Rep: TATA-box-binding protein -
Volvox carteri f. nagariensis
Length = 340
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I++SG++ CTGA SED ++ AARRYA+ +QKLGF
Sbjct: 81 TTALIFASGKMVCTGAKSEDDSRTAARRYAKIVQKLGF 118
>UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=2; Eukaryota|Rep: Chromosome
undetermined scaffold_25, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 201
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+ SG++ CTGA SEDQ+ IAAR+YA+ + KLGF
Sbjct: 71 TTALIFQSGKMVCTGAKSEDQSLIAARKYAKIINKLGF 108
>UniRef50_Q9XZQ7 Cluster: TBP-like factor; n=3; Caenorhabditis|Rep:
TBP-like factor - Caenorhabditis elegans
Length = 454
Score = 52.0 bits (119), Expect = 1e-05
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 13/177 (7%)
Frame = +3
Query: 225 HIHTQCPNTYVPDHEYCETTAQTPSQRQA-----ITELAPTQPAVDEEEETPE---IDIM 380
H P YVP + PS + ++ P + EE P+ IDI
Sbjct: 207 HAQQPHPQIYVPRDMNLAVPLREPSPEPIPVKIEVPDVPPEGTSAANEEPMPDDGDIDIQ 266
Query: 381 INNVVCSFSVKCHLNLRQIXLNGVNVEFRRENG-MVTMKXXXXXXXXXFGRQD----A*R 545
I NVVC++++ H++LR++ +N NV + RE G M+ K + R
Sbjct: 267 IRNVVCNYTLPLHIDLRKLAMNTHNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCR 326
Query: 546 ARAPPVKIKRRLLLDVMHAPYRNSALKCASATFV*SMY*ETCRMPFGIRIISFSKKY 716
+ A + R + V + + + + + TCR+PFGI+I + KY
Sbjct: 327 SEADCKRAARSIARHVQRVMGKTKE-RVSIRNYRVNNVLATCRLPFGIKIEEVAAKY 382
>UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 242
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TT ++SSG++ TGA SE AK+AAR++ARALQK GF
Sbjct: 81 TTTLVFSSGKMVITGAKSEALAKLAARKHARALQKCGF 118
>UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1;
Ostreococcus tauri|Rep: TATA-box-binding protein -
Ostreococcus tauri
Length = 258
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA +E A+ AAR+YA+ + KLGF
Sbjct: 114 TTALIFSSGKMVCTGAKTEALAREAARKYAKVIIKLGF 151
>UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep:
TBP-related factor - Drosophila melanogaster (Fruit fly)
Length = 224
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TA I+ +G+V CTGA +E +A I +R++AR LQKLGF
Sbjct: 96 TALIFRTGKVICTGARNEIEADIGSRKFARILQKLGF 132
Score = 36.3 bits (80), Expect = 0.77
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 321 LAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNVEF--RRENGMV 485
L P QP E + + +I + N+V +FSV C L+L+ I N E+ +R G++
Sbjct: 31 LQPQQPVALVEPKDAQHEIRLQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVI 87
>UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistosoma
japonicum|Rep: TATA-box-binding protein - Schistosoma
japonicum (Blood fluke)
Length = 227
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
T ++ +GR+ CTGA SE A + +R+ AR +QKLGF+
Sbjct: 98 TCLVFGTGRMVCTGARSEADANLGSRKCARIIQKLGFD 135
>UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeba
histolytica|Rep: TATA-box-binding protein - Entamoeba
histolytica
Length = 234
Score = 44.0 bits (99), Expect = 0.004
Identities = 15/38 (39%), Positives = 31/38 (81%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
+TA I+ +G++ CTG S +++KIA+++YA+ ++K+G+
Sbjct: 100 STALIFQTGKIVCTGTRSIEESKIASKKYAKIIKKIGY 137
>UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: TATA-box-binding
protein - Oryza sativa subsp. indica (Rice)
Length = 264
Score = 41.1 bits (92), Expect(2) = 0.006
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARR 592
TTA I++SG++ CTGA SED +K+AAR+
Sbjct: 93 TTALIFASGKMVCTGAKSEDHSKLAARK 120
Score = 21.4 bits (43), Expect(2) = 0.006
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 590 RYARALQKLGF 622
+YAR +QKLGF
Sbjct: 158 QYARIVQKLGF 168
>UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba
histolytica|Rep: TBP-related factor - Entamoeba
histolytica
Length = 216
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA ++ SG++ TG + D +++A R+YAR LQ+LG+
Sbjct: 85 TTALVFHSGKLVVTGGKTVDDSRLAGRKYARILQRLGY 122
>UniRef50_Q9XZP5 Cluster: TBP-like factor; n=1; Brugia malayi|Rep:
TBP-like factor - Brugia malayi (Filarial nematode worm)
Length = 295
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +3
Query: 345 DEEEETPEIDIM-----INNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMV 485
D+ +E EIDI I NVVC++++ H++L ++ LN NV F R G++
Sbjct: 34 DDSDEDGEIDIQCFEFQIRNVVCNYTLPLHIDLHRVALNSGNVAFDRGRGVL 85
>UniRef50_Q4MYF6 Cluster: Putative uncharacterized protein; n=4;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 662
Score = 37.1 bits (82), Expect = 0.44
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 165 PREWY*RAEQGHPRGSGKPWHIHTQCPNTYVPDHEYCETTAQTPSQRQAITELAPTQPAV 344
P+ Y E HP + +P H + + P TY P Y TTA P + + QP
Sbjct: 217 PQPQYEYYEPSHPSHTTQPQHQYYEPPQTYQPQQYYQPTTAPPPQPQLPQQQYEYYQPTT 276
Query: 345 DEEEETPE 368
+ PE
Sbjct: 277 APQTSQPE 284
>UniRef50_Q7RRN4 Cluster: TATA element modulatory factor; n=5;
Plasmodium|Rep: TATA element modulatory factor -
Plasmodium yoelii yoelii
Length = 382
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 506 VTTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
V SI+S+G++ CTG S + KIA ++ + L++L F+
Sbjct: 216 VINVSIFSNGKIICTGNNSIEACKIAMKKVEKKLKQLNFK 255
>UniRef50_Q4X631 Cluster: Transcription initiation TFIID-like,
putative; n=1; Plasmodium chabaudi|Rep: Transcription
initiation TFIID-like, putative - Plasmodium chabaudi
Length = 228
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 506 VTTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
V SI+S+G++ CTG S + KIA ++ + L++L F+
Sbjct: 155 VINVSIFSNGKIICTGNNSIEACKIAMKKVEKKLKQLNFK 194
>UniRef50_A5K0W3 Cluster: Transcription initiation TFIID-like,
putative; n=1; Plasmodium vivax|Rep: Transcription
initiation TFIID-like, putative - Plasmodium vivax
Length = 334
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 506 VTTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
+ SI+++G++ CTG S + KIA ++ R L++L F+
Sbjct: 168 IINVSIFANGKIICTGNNSIEACKIAMKKIERKLKQLNFK 207
>UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3;
Cryptosporidium|Rep: TATA-box factor binding protein -
Cryptosporidium parvum Iowa II
Length = 249
Score = 34.3 bits (75), Expect = 3.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
T ++ SGR+ TGA E+ AK+ ++ A+ QK GF
Sbjct: 117 TGLLFRSGRLMITGARLENDAKLGGKKMAKICQKSGF 153
>UniRef50_Q1JTB3 Cluster: Putative uncharacterized protein
precursor; n=1; Toxoplasma gondii RH|Rep: Putative
uncharacterized protein precursor - Toxoplasma gondii RH
Length = 611
Score = 34.3 bits (75), Expect = 3.1
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
T +TP+ +AI PT D E E D + V SV +RQ+ L G +V
Sbjct: 200 TDQKTPASEKAIVTAEPTTS--DSETRKRETDNAREHAVAESSVSRSSRVRQLILEGFHV 257
Query: 459 EFRRENGMVTMK 494
R+N + K
Sbjct: 258 SSERQNALFKPK 269
>UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6;
Thermococcaceae|Rep: TATA-box-binding protein -
Pyrococcus abyssi
Length = 191
Score = 34.3 bits (75), Expect = 3.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 521 IWSSGRVTCTGATSEDQAKIAARRYARALQKLG 619
++SSG++ C+GA SE A A R+ R L+K G
Sbjct: 150 LFSSGKIVCSGAKSEADAWEAVRKLLRELEKYG 182
>UniRef50_A6WIS4 Cluster: Putative uncharacterized protein; n=1;
Shewanella baltica OS185|Rep: Putative uncharacterized
protein - Shewanella baltica OS185
Length = 295
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 291 TPSQRQAITELAPTQPAVDEEEETPEIDIMINNV--VCSFSVKCHLNLRQIXLNGVNVEF 464
TP+ ++A++EL P D++ + ID+++ + +C+ H+N + N ++ F
Sbjct: 113 TPNFKRALSELKKATPQYDQDNDESWIDVLLEHYWDICNV---IHVNGLENSFNIISPRF 169
Query: 465 RRENGM 482
R NGM
Sbjct: 170 RHINGM 175
>UniRef50_Q54J79 Cluster: Leucine-rich repeat-containing protein;
n=2; Dictyostelium discoideum|Rep: Leucine-rich
repeat-containing protein - Dictyostelium discoideum AX4
Length = 1726
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 55 FSKNENLNSYSHQNIKIYNQCWKGDVNHSVVVMATLIQENGIKELSKGTHGVVANHGIST 234
F + NL S+ + I++ + C GDVN+ ++ + + + +KE K H +V + + T
Sbjct: 173 FKVSTNLLSHHKKQIELTHACTVGDVNYLDQIILSGVSTDQLKEAHKAGHAIVFD-SLLT 231
Query: 235 HS 240
H+
Sbjct: 232 HN 233
>UniRef50_Q6FMY4 Cluster: Similarities with sp|P32338 Saccharomyces
cerevisiae YGR044c; n=1; Candida glabrata|Rep:
Similarities with sp|P32338 Saccharomyces cerevisiae
YGR044c - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 547
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 270 YCETTAQTPSQRQAITE-LAPTQPAVDEEEETPEIDIMINNVV-CSFSVKCHLNLRQIXL 443
Y E +A T S R +++ + T+P ++ + +NN C V CH N ++ L
Sbjct: 287 YGEISAGTSSYRNMVSQWTSGTEPTFNDAVSVGPLSCSMNNASRCDMDVNCHTNSDELPL 346
Query: 444 NGVNV 458
+ +N+
Sbjct: 347 SNINL 351
>UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15;
Coelomata|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 260
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 112 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 167
Query: 459 EF 464
E+
Sbjct: 168 EY 169
>UniRef50_A0RWZ0 Cluster: TATA-box binding protein (TBP), component
of TFIID and TFIIIB; n=4; Thermoprotei|Rep: TATA-box
binding protein (TBP), component of TFIID and TFIIIB -
Cenarchaeum symbiosum
Length = 186
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
T I++SG++ CTG+ SE+ A+ A + + L+K G +
Sbjct: 54 TATLIFTSGKMVCTGSKSEEMARKAVKTVVQKLRKGGIK 92
>UniRef50_A7RUE6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 638
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +3
Query: 231 HTQCPNTYVPDHEYCETTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSV 410
H+ C ++Y +H A+ +Q + + ++PA+ TP ID+ + + S
Sbjct: 459 HSTCYSSYSSEHNLRHCHAKFEAQARDVKNQISSEPAISTRSSTPPIDLSKCFICGNRSY 518
Query: 411 KCHLNLRQIXLNGVNVEFRR 470
K L I N ++ R+
Sbjct: 519 KKDKRLLNIATNEASLSLRQ 538
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,381,462
Number of Sequences: 1657284
Number of extensions: 13298495
Number of successful extensions: 40590
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 38820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40565
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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