Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021819
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 240  CPNTYVPDHEYCETTAQTPSQRQAITELAP-TQPAVDEEEET 362
            CPN    + ++C+    T     A + +AP T P V ++  T
Sbjct: 2265 CPNGLFWNKDHCDWPENTECHPDASSTMAPSTTPMVPDKPVT 2306


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 40  IWLLSFSKNENLNSYSHQ 93
           +W+++  KNENL+    Q
Sbjct: 449 VWIVALFKNENLSEMVKQ 466


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 431 SQVQVALNTKTAHDIVYHDINFWSLLF 351
           S   + L      D + +  NFW++LF
Sbjct: 50  SYTYIKLVVSVLMDFIAYFFNFWTILF 76


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 494 LHRYHPILTSKFYI 453
           +H Y+P+ T  FY+
Sbjct: 110 VHFYYPVATMSFYV 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,844
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)