Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021819
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein. 64 5e-10
BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein. 64 5e-10
AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein. 64 5e-10
AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein. 64 5e-10
AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein. 64 5e-10
AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding protei... 64 5e-10
AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein. 64 5e-10
AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein. 64 5e-10
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 59 2e-08
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 59 2e-08
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 59 2e-08
DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protei... 59 2e-08
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 59 2e-08
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 59 2e-08
BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protei... 59 2e-08
BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protei... 59 2e-08
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 59 2e-08
BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein. 59 2e-08
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 59 2e-08
AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3 pr... 59 2e-08
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 59 2e-08
AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein. 58 2e-08
AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein. 52 3e-06
AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protei... 34 0.45
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 33 0.79
AL139410-3|CAI12718.1| 902|Homo sapiens RUN and SH3 domain cont... 30 7.4
AL139410-2|CAI12719.1| 796|Homo sapiens RUN and SH3 domain cont... 30 7.4
>BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.8 bits (131), Expect = 7e-08
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDAGKVLMK 50
>AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein.
Length = 128
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein.
Length = 163
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding
protein-related factor 2 protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein.
Length = 186
Score = 64.1 bits (149), Expect = 5e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGFE 625
TA+IWSSG++ CTGATSE++AK ARR AR+LQKLGF+
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQ 94
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 205 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 242
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 131 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 186
Query: 459 EF 464
E+
Sbjct: 187 EY 188
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 246
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRRRNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 246 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 283
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 246
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 206 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 243
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 132 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 187
Query: 459 EF 464
E+
Sbjct: 188 EY 189
>BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 246 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 283
>BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 246 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 283
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 208 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 245
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 134 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 189
Query: 459 EF 464
E+
Sbjct: 190 EY 191
>BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein.
Length = 288
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 158 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 195
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 84 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 139
Query: 459 EF 464
E+
Sbjct: 140 EY 141
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 208 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 245
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 134 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 189
Query: 459 EF 464
E+
Sbjct: 190 EY 191
>AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3
protein.
Length = 375
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 246 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 283
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +2
Query: 509 TTASIWSSGRVTCTGATSEDQAKIAARRYARALQKLGF 622
TTA I+SSG++ CTGA SE+Q+++AAR+YAR +QKLGF
Sbjct: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGF 246
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein.
Length = 91
Score = 58.4 bits (135), Expect = 2e-08
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +2
Query: 512 TASIWSSGRVTCTGATSEDQAKIAARRYARALQKL 616
TA+IWSSG++ CTGATSE++AK ARR AR+LQKL
Sbjct: 57 TATIWSSGKIICTGATSEEEAKFGARRLARSLQKL 91
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENGMVTMK 494
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G V MK
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMK 50
>AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein.
Length = 45
Score = 51.6 bits (118), Expect = 3e-06
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 369 IDIMINNVVCSFSVKCHLNLRQIXLNGVNVEFRRENG 479
+DI+I NVVC F +CHLNLR+I L G NV ++R+ G
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVG 45
>AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protein
protein.
Length = 100
Score = 34.3 bits (75), Expect = 0.45
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +2
Query: 563 EDQAKIAARRYARALQKLGF 622
E+Q+++AAR+YAR +QKLGF
Sbjct: 1 EEQSRLAARKYARVVQKLGF 20
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 33.5 bits (73), Expect = 0.79
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 279 TTAQTPSQRQAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIXLNGVNV 458
TT PS +T + P PA + P++ N+V + ++ C L+L+ I L N
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQ----NIVSTVNLGCKLDLKTIALRARNA 190
Query: 459 EF 464
E+
Sbjct: 191 EY 192
>AL139410-3|CAI12718.1| 902|Homo sapiens RUN and SH3 domain
containing 1 protein.
Length = 902
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +3
Query: 147 GHGDAHPREWY*RAEQGHPRGSGKPWHIHTQCPNTYVPDHEYCETTAQTP-----SQRQA 311
G DAHP+ EQG P S P T P+++ + C + +P S A
Sbjct: 128 GDEDAHPQPSIIPLEQGSPLASAGP---GTCSPDSFCCSPDSCSGASSSPDPGLDSNCNA 184
Query: 312 ITELAPT-QPAVDEEEETPEIDI 377
+T P ++EE+E E D+
Sbjct: 185 LTTCQDVPSPGLEEEDERAEQDL 207
>AL139410-2|CAI12719.1| 796|Homo sapiens RUN and SH3 domain
containing 1 protein.
Length = 796
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +3
Query: 147 GHGDAHPREWY*RAEQGHPRGSGKPWHIHTQCPNTYVPDHEYCETTAQTP-----SQRQA 311
G DAHP+ EQG P S P T P+++ + C + +P S A
Sbjct: 128 GDEDAHPQPSIIPLEQGSPLASAGP---GTCSPDSFCCSPDSCSGASSSPDPGLDSNCNA 184
Query: 312 ITELAPT-QPAVDEEEETPEIDI 377
+T P ++EE+E E D+
Sbjct: 185 LTTCQDVPSPGLEEEDERAEQDL 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,747,401
Number of Sequences: 237096
Number of extensions: 2087920
Number of successful extensions: 4974
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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