Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021819
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 240  CPNTYVPDHEYCETTAQTP-SQRQAITELAPTQPAVDEEEETPE 368
            C +  + DH   +T  Q P  Q+Q   +  P Q +   +++ P+
Sbjct: 1487 CDSKLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQ 1530


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +1

Query: 67  ENLNSYSHQNIKIYNQCWKGDVNHSVVVMATLIQENGIKELSK 195
           E L S+  +  ++  QCW G+ +   ++ A +     I++ +K
Sbjct: 822 ERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAK 864


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +1

Query: 67  ENLNSYSHQNIKIYNQCWKGDVNHSVVVMATLIQENGIKELSK 195
           E L S+  +  ++  QCW G+ +   ++ A +     I++ +K
Sbjct: 860 ERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAK 902


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 214 PLPRGCPCSAL 182
           PLP GCP +A+
Sbjct: 215 PLPLGCPVNAI 225


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 375 IMINNVVCSFSVKCHLNLRQIXLN 446
           I +NN+  S+ +KC +  +   LN
Sbjct: 49  IKLNNIPKSYGIKCEIYAKCEFLN 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,978
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)