Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021818
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 161 4e-40
L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 144 8e-35
L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 91 8e-19
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z83224-2|CAE17796.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81125-11|CAE17965.1| 208|Caenorhabditis elegans Hypothetical p... 29 3.7
Z81047-14|CAH04642.1| 357|Caenorhabditis elegans Hypothetical p... 29 3.7
AL032663-8|CAD89752.1| 321|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81125-7|CAJ85774.1| 84|Caenorhabditis elegans Hypothetical pr... 29 4.9
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z73975-3|CAA98277.2| 269|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70781-8|CAA94836.2| 269|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical... 28 6.5
AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical ... 28 6.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 8.6
>L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein
2, isoform a protein.
Length = 777
Score = 161 bits (392), Expect = 4e-40
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 LRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNK 182
LRLRPDRVAMQDATAQMAMLQFISSGLP+ AVPSTIHCDHLIEAQ GG +DLARAKDLNK
Sbjct: 86 LRLRPDRVAMQDATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNK 145
Query: 183 EVYKFLETAGAKYGVGFWKPGSGI 254
EV+ FL TAG+KYGVGFWKPGSGI
Sbjct: 146 EVFNFLATAGSKYGVGFWKPGSGI 169
Score = 138 bits (334), Expect = 4e-33
Identities = 65/85 (76%), Positives = 69/85 (81%)
Frame = +2
Query: 257 HQIILENYAFPGLLMIGTDSHTPNXXXXXXXXXXXXXADAVDVMANIPWELKCPKVIGVK 436
HQIILENYAFPGLL+IGTDSHTPN ADAVDVMA+IPWELKCPKVIG+K
Sbjct: 171 HQIILENYAFPGLLLIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGIK 230
Query: 437 LTGKLTGWTSPKDVILKVAGILTVR 511
LTGKL GWTS KDVILKVA ILTV+
Sbjct: 231 LTGKLNGWTSAKDVILKVADILTVK 255
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 508 EGGTGAIVEYHGPGVDHISCTGMATICNMGAEIGATTSVFPYNSRMEAYLK 660
+GGTGAIVEY GPGVD IS TGM TICNMGAEIGATTSVFPYN M YL+
Sbjct: 255 KGGTGAIVEYFGPGVDSISATGMGTICNMGAEIGATTSVFPYNESMYKYLE 305
>L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein
2, isoform c protein.
Length = 683
Score = 144 bits (348), Expect = 8e-35
Identities = 66/75 (88%), Positives = 70/75 (93%)
Frame = +3
Query: 30 MQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLNKEVYKFLETA 209
MQDATAQMAMLQFISSGLP+ AVPSTIHCDHLIEAQ GG +DLARAKDLNKEV+ FL TA
Sbjct: 1 MQDATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGAQDLARAKDLNKEVFNFLATA 60
Query: 210 GAKYGVGFWKPGSGI 254
G+KYGVGFWKPGSGI
Sbjct: 61 GSKYGVGFWKPGSGI 75
Score = 138 bits (334), Expect = 4e-33
Identities = 65/85 (76%), Positives = 69/85 (81%)
Frame = +2
Query: 257 HQIILENYAFPGLLMIGTDSHTPNXXXXXXXXXXXXXADAVDVMANIPWELKCPKVIGVK 436
HQIILENYAFPGLL+IGTDSHTPN ADAVDVMA+IPWELKCPKVIG+K
Sbjct: 77 HQIILENYAFPGLLLIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGIK 136
Query: 437 LTGKLTGWTSPKDVILKVAGILTVR 511
LTGKL GWTS KDVILKVA ILTV+
Sbjct: 137 LTGKLNGWTSAKDVILKVADILTVK 161
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 508 EGGTGAIVEYHGPGVDHISCTGMATICNMGAEIGATTSVFPYNSRMEAYLK 660
+GGTGAIVEY GPGVD IS TGM TICNMGAEIGATTSVFPYN M YL+
Sbjct: 161 KGGTGAIVEYFGPGVDSISATGMGTICNMGAEIGATTSVFPYNESMYKYLE 211
>L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein
2, isoform b protein.
Length = 665
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 371 DAVDVMANIPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAGILTVR 511
DAVDVMA+IPWELKCPKVIG+KLTGKL GWTS KDVILKVA ILTV+
Sbjct: 97 DAVDVMADIPWELKCPKVIGIKLTGKLNGWTSAKDVILKVADILTVK 143
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 508 EGGTGAIVEYHGPGVDHISCTGMATICNMGAEIGATTSVFPYNSRMEAYLK 660
+GGTGAIVEY GPGVD IS TGM TICNMGAEIGATTSVFPYN M YL+
Sbjct: 143 KGGTGAIVEYFGPGVDSISATGMGTICNMGAEIGATTSVFPYNESMYKYLE 193
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 3 LRLRPDRVAMQDATAQMA 56
LRLRPDRVAMQDA MA
Sbjct: 86 LRLRPDRVAMQDAVDVMA 103
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = +1
Query: 511 GGTGAIVEYHGPGVDHISCTGMATICNMGAEIGATTSVFPYNSRMEAYL 657
G G VE+ G GV +S ATI NM E GAT FP +SR YL
Sbjct: 271 GVVGKFVEFFGTGVASLSIADRATIANMCPEYGATIGFFPVDSRTIDYL 319
>U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical
protein F10G7.5a protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 520 GAIVEYHGPGVDHIS--CTGMATICNMGAEIGATTSVFPY 633
GA++ + P V +S +AT+C M + IG T S+FPY
Sbjct: 327 GAVLAFSMPLVKMVSNDVLFLATVCLMFSCIGGTFSIFPY 366
>U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical
protein F10G7.5b protein.
Length = 471
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 520 GAIVEYHGPGVDHIS--CTGMATICNMGAEIGATTSVFPY 633
GA++ + P V +S +AT+C M + IG T S+FPY
Sbjct: 341 GAVLAFSMPLVKMVSNDVLFLATVCLMFSCIGGTFSIFPY 380
>Z83224-2|CAE17796.1| 208|Caenorhabditis elegans Hypothetical
protein F29C6.1a protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Frame = +3
Query: 15 PDRVAMQDATAQMAMLQFIS--SGLPRVAV-PSTIHCDHLIEAQVGG----EKDLARAKD 173
P M A A+ F+ +G+P + + T+H D LIE Q+ G EKD ++ +D
Sbjct: 120 PSSTYMSHAYAKNFTPVFVKDENGIPFIYIFKETVHADGLIEDQIAGMSLKEKDESKVED 179
Query: 174 LNKEV 188
N+EV
Sbjct: 180 -NEEV 183
>Z81125-11|CAE17965.1| 208|Caenorhabditis elegans Hypothetical
protein F29C6.1a protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Frame = +3
Query: 15 PDRVAMQDATAQMAMLQFIS--SGLPRVAV-PSTIHCDHLIEAQVGG----EKDLARAKD 173
P M A A+ F+ +G+P + + T+H D LIE Q+ G EKD ++ +D
Sbjct: 120 PSSTYMSHAYAKNFTPVFVKDENGIPFIYIFKETVHADGLIEDQIAGMSLKEKDESKVED 179
Query: 174 LNKEV 188
N+EV
Sbjct: 180 -NEEV 183
>Z81047-14|CAH04642.1| 357|Caenorhabditis elegans Hypothetical
protein C41G6.16 protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 455 GWTSPKDVILKVAGILTVRE-VPAPSWSTTDPGWTTSRVQAWRQSATWALR 604
G+TS D++ K+A +L + +W+T G S++QA R+S W LR
Sbjct: 116 GYTSIFDLVFKLATVLLNETWLMIAAWTTLFLG--LSQIQAIRKSKEWTLR 164
>AL032663-8|CAD89752.1| 321|Caenorhabditis elegans Hypothetical
protein Y75B12B.10 protein.
Length = 321
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 455 GWTSPKDVILKVAGILTVRE-VPAPSWSTTDPGWTTSRVQAWRQSATWALR 604
G+TS D++ K+A +L + +W+T G S++QA R+S W LR
Sbjct: 91 GYTSIFDLVFKLATVLLNETWLMIAAWTTLFLG--LSQIQAIRKSKEWTLR 139
>Z81125-7|CAJ85774.1| 84|Caenorhabditis elegans Hypothetical
protein F29C6.1b protein.
Length = 84
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +3
Query: 75 SGLPRVAV-PSTIHCDHLIEAQVGG----EKDLARAKDLNKEV 188
+G+P + + T+H D LIE Q+ G EKD ++ +D N+EV
Sbjct: 18 NGIPFIYIFKETVHADGLIEDQIAGMSLKEKDESKVED-NEEV 59
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 395 IPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAG 496
I W+++ +++ + T + GW S +D+++K+ G
Sbjct: 785 IAWKIRKCQILIFRRTSENHGWQSVRDILIKILG 818
>Z73975-3|CAA98277.2| 269|Caenorhabditis elegans Hypothetical
protein F57A8.1 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 568 YTRCGPPRVRGTPRWRRYLPHSQDAGHLQDHIFRTRPAGEFTGQFDADN 422
Y PPRV +P W+R +D D R +G TG D+DN
Sbjct: 86 YLHSNPPRVSASPAWKR----DRDETESWDSF--GRESGIMTGDNDSDN 128
>Z70781-8|CAA94836.2| 269|Caenorhabditis elegans Hypothetical
protein F57A8.1 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 568 YTRCGPPRVRGTPRWRRYLPHSQDAGHLQDHIFRTRPAGEFTGQFDADN 422
Y PPRV +P W+R +D D R +G TG D+DN
Sbjct: 86 YLHSNPPRVSASPAWKR----DRDETESWDSF--GRESGIMTGDNDSDN 128
>AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical
protein F39E9.1 protein.
Length = 443
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 543 SVVLHDGAGTSLTVRMPATFKITSFGLVQPVSLPVNLTPITLGHFS 406
+V+ + G G S T SF +QP +L +N T + G F+
Sbjct: 338 NVIFNQGGGISAQSYATNTIHAQSFTYMQPETLTINATSLLPGFFT 383
>AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical
protein Y46D2A.2 protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 543 SVVLHDGAGTSLTVRMPATFKITSFGLVQPVSLPVNLTPITLGHFS 406
+V+ + G G S T SF +QP +L +N T + G F+
Sbjct: 234 NVIFNQGGGISAQSYATNTIHAQSFTYMQPETLTINATSLLPGFFT 279
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +2
Query: 452 TGWTSPKDVILKVAGILTVREVPA------PSWSTTDPGWTTSRVQAWRQSATWALRSAL 613
T WT P D + V + V E P P+ T T+S Q R TWA +
Sbjct: 346 TSWTRPTDGRVHVMPGIRVTETPPTIQTPPPTTQTPPTTQTSSTTQTPRTKQTWAPWTP- 404
Query: 614 PLACSRTTP 640
P +R TP
Sbjct: 405 PTTTTRQTP 413
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,270,832
Number of Sequences: 27780
Number of extensions: 427732
Number of successful extensions: 1168
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -