BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021816X (536 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical... 120 7e-28 Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 3.7 Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 3.7 Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 3.7 Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 3.7 Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z67738-1|CAA91545.2| 352|Caenorhabditis elegans Hypothetical pr... 27 6.5 U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 27 6.5 Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical pr... 27 8.6 U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.6 >AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical protein Y48B6A.12 protein. Length = 620 Score = 120 bits (289), Expect = 7e-28 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 2/88 (2%) Frame = +3 Query: 252 QYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK 431 +YI L L DRNE L+YR + DNV E+MPIVYTPTVG ACQ FG +YR P+GL+ITI+D Sbjct: 107 KYIQLDSLQDRNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKGLYITINDN 166 Query: 432 --GHVYDVLKNWPETDVRAIVVTDGERI 509 ++ +L NWP +VRAIV+TDGERI Sbjct: 167 SISKIHQILANWPTENVRAIVITDGERI 194 Score = 64.5 bits (150), Expect = 5e-11 Identities = 27/40 (67%), Positives = 33/40 (82%) Frame = +1 Query: 85 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQ 204 G+D LK PGLNKGMAF++ ERQ LG+HGLLPP T+E+Q Sbjct: 51 GIDLLKSPGLNKGMAFSLHERQYLGVHGLLPPAFMTEEQQ 90 >Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein F53B7.5b protein. Length = 2892 Score = 28.3 bits (60), Expect = 3.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 256 TSILWGSWTAMSICSTVS 309 TS +WG W A S C TV+ Sbjct: 52 TSAIWGDWGAWSTCPTVT 69 >Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein F53B7.5a protein. Length = 3095 Score = 28.3 bits (60), Expect = 3.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 256 TSILWGSWTAMSICSTVS 309 TS +WG W A S C TV+ Sbjct: 52 TSAIWGDWGAWSTCPTVT 69 >Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical protein F53B7.5b protein. Length = 2892 Score = 28.3 bits (60), Expect = 3.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 256 TSILWGSWTAMSICSTVS 309 TS +WG W A S C TV+ Sbjct: 52 TSAIWGDWGAWSTCPTVT 69 >Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical protein F53B7.5a protein. Length = 3095 Score = 28.3 bits (60), Expect = 3.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 256 TSILWGSWTAMSICSTVS 309 TS +WG W A S C TV+ Sbjct: 52 TSAIWGDWGAWSTCPTVT 69 >Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical protein F17B5.3 protein. Length = 239 Score = 27.9 bits (59), Expect = 4.9 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 451 RTSYTCPLSWIVMKRPLGR 395 R + TCP WI +RP GR Sbjct: 66 RPTRTCPRDWITFERPQGR 84 >Z67738-1|CAA91545.2| 352|Caenorhabditis elegans Hypothetical protein W03G11.2 protein. Length = 352 Score = 27.5 bits (58), Expect = 6.5 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = -1 Query: 389 HKPELLTGQANRRSVHNWHHFSHVIRDETVEQMLIAVQEPHKIDV-LLSGFSYLSIESLH 213 HK + + +W F H ++ + +E + V + + I + + +L I L Sbjct: 6 HKDVIFNDELEENEKFSWDEFVHKLKQQQLEGQVPVVSKRYAISITVFFALLFLGISQLL 65 Query: 212 SSTCSSCVLTR 180 +S +L R Sbjct: 66 ASANEKVILIR 76 >U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical protein T19D2.1 protein. Length = 872 Score = 27.5 bits (58), Expect = 6.5 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 Query: 244 PLNNTSILWGSWTAMSICST 303 PL N S LW W++ S CST Sbjct: 820 PLVNRSGLWTGWSSWSSCST 839 >Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical protein C31G12.2 protein. Length = 195 Score = 27.1 bits (57), Expect = 8.6 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = -2 Query: 511 QIRSPSVTTMARTSVSGQFLRTSYTCPLSWIVMKRPLG 398 Q+ + + TT T+ + T CP W +RP G Sbjct: 18 QVETTTSTTTTTTTTTSTTTTTPIPCPTGWEEFERPSG 55 >U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein R04E5.8a protein. Length = 997 Score = 27.1 bits (57), Expect = 8.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -1 Query: 167 PCMPKS*RSSMVKAMPLLRPGCLRWSRPERPLVGCPSPEPYNPIRS 30 P P+ R+ ++ P RP S RP PSPEP NP R+ Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRT 186 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,864,689 Number of Sequences: 27780 Number of extensions: 320432 Number of successful extensions: 928 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 888 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 924 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1070714938 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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