Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021814X
         (567 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0177 + 14938920-14940314                                        102   2e-22
03_06_0024 + 31103185-31104579                                        101   5e-22
12_02_0176 + 14933044-14934438                                         99   2e-21
03_05_0258 - 22442527-22443927                                         99   2e-21
03_04_0132 + 17580131-17581054,17581488-17582036                       98   4e-21
09_06_0254 - 21872694-21872873,21872992-21873046,21873548-218736...    27   7.9  

>12_02_0177 + 14938920-14940314
          Length = 464

 Score =  102 bits (244), Expect = 2e-22
 Identities = 45/75 (60%), Positives = 58/75 (77%)
 Frame = +1

Query: 319 SVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIR 498
           +VIALKCP I+V V D S+ R+  WNSD+LPIYEPGLD+VV+ECRG+NLFFST++ + + 
Sbjct: 2   AVIALKCPAIEVVVVDISKPRVDAWNSDQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVA 61

Query: 499 EAD*YLYPLTRPTKT 543
           EAD     +  PTKT
Sbjct: 62  EADIIFVSVNTPTKT 76


>03_06_0024 + 31103185-31104579
          Length = 464

 Score =  101 bits (241), Expect = 5e-22
 Identities = 45/75 (60%), Positives = 58/75 (77%)
 Frame = +1

Query: 319 SVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIR 498
           +VIALKCP I+V V D S+ RI  WNS++LPIYEPGLD+VV+ECRG+NLFFST++ + + 
Sbjct: 2   AVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVA 61

Query: 499 EAD*YLYPLTRPTKT 543
           EAD     +  PTKT
Sbjct: 62  EADIIFVSVNTPTKT 76


>12_02_0176 + 14933044-14934438
          Length = 464

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/75 (58%), Positives = 58/75 (77%)
 Frame = +1

Query: 319 SVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIR 498
           +VIALKCP I+V V D S+ RI  WNS++LPIYEPGLD+VV+ECRG+NLFFST++ + + 
Sbjct: 2   AVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKECRGRNLFFSTDVEKHVA 61

Query: 499 EAD*YLYPLTRPTKT 543
           EA+     +  PTKT
Sbjct: 62  EANIIFVSVNTPTKT 76


>03_05_0258 - 22442527-22443927
          Length = 466

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 43/75 (57%), Positives = 57/75 (76%)
 Frame = +1

Query: 319 SVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIR 498
           +VIALKCP+++V V D S  RI+ WNS++LPIYEPGLDDVVR+CRG+NLFFST++   + 
Sbjct: 2   AVIALKCPDVEVVVVDISAPRIEGWNSERLPIYEPGLDDVVRQCRGRNLFFSTDVERHVA 61

Query: 499 EAD*YLYPLTRPTKT 543
           +A      +  PTKT
Sbjct: 62  DAGIVFVSVNTPTKT 76


>03_04_0132 + 17580131-17581054,17581488-17582036
          Length = 490

 Score = 98.3 bits (234), Expect = 4e-21
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = +1

Query: 319 SVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRECRGKNLFFSTNIAESIR 498
           +VIALKCP+++V V D S  RI  WNSD LPIYEPGLDDVVR CRG+NLFFS+++   + 
Sbjct: 2   AVIALKCPDVEVVVVDISAARIDAWNSDALPIYEPGLDDVVRRCRGRNLFFSSDVERHVG 61

Query: 499 EAD*YLYPLTRPTK 540
           EAD     +  PTK
Sbjct: 62  EADIVFVSVNTPTK 75


>09_06_0254 -
           21872694-21872873,21872992-21873046,21873548-21873600,
           21873683-21873759,21873842-21873965,21874050-21874175,
           21874861-21875011,21875112-21875220,21875791-21875854,
           21876334-21876450
          Length = 351

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -2

Query: 545 WVFVGRVNGYKY*SASRMLSAMFVEKNKFLPLHSRTTSSRPGS*IGSLSEFHCFIL 378
           ++  GRVNG    + +R +  M +++N+FLP   +  ++ P      LSE   FI+
Sbjct: 214 FIVAGRVNGSL--NLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIV 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,941,948
Number of Sequences: 37544
Number of extensions: 299224
Number of successful extensions: 638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)