Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021814X
         (567 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73974-4|CAA98269.1|  481|Caenorhabditis elegans Hypothetical pr...   123   8e-29
AY147932-1|AAN39842.1|  481|Caenorhabditis elegans UDP-glucose d...   123   8e-29
U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical p...    27   7.1  
AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate o...    27   7.1  

>Z73974-4|CAA98269.1|  481|Caenorhabditis elegans Hypothetical
           protein F29F11.1 protein.
          Length = 481

 Score =  123 bits (297), Expect = 8e-29
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +1

Query: 268 IQKICCLGAGYVGGPTCSVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRE 447
           + K+ C+GAGYVGGPTC++IA KCP+I VTV D +  +I +WNSDKLPIYEPGLD++V  
Sbjct: 9   VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFA 68

Query: 448 CRGKNLFFSTNIAESIREAD*YLYPLTRPTKTH 546
            RG+NLFFS++I ++I EAD     +  PTK +
Sbjct: 69  ARGRNLFFSSDIPKAIAEADLIFISVNTPTKMY 101


>AY147932-1|AAN39842.1|  481|Caenorhabditis elegans UDP-glucose
           dehydrogenase protein.
          Length = 481

 Score =  123 bits (297), Expect = 8e-29
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +1

Query: 268 IQKICCLGAGYVGGPTCSVIALKCPNIKVTVCDKSEERIKQWNSDKLPIYEPGLDDVVRE 447
           + K+ C+GAGYVGGPTC++IA KCP+I VTV D +  +I +WNSDKLPIYEPGLD++V  
Sbjct: 9   VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFA 68

Query: 448 CRGKNLFFSTNIAESIREAD*YLYPLTRPTKTH 546
            RG+NLFFS++I ++I EAD     +  PTK +
Sbjct: 69  ARGRNLFFSSDIPKAIAEADLIFISVNTPTKMY 101


>U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical
           protein F18E3.7a protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 265 VIQKICCLGAGYVGGPTCSVIALKCPNIKVTV 360
           +I KI  +G G +G  +   I+   PN K+TV
Sbjct: 4   IIPKIAIIGEGVIGCTSALQISKAIPNAKITV 35


>AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate
           oxidase protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 265 VIQKICCLGAGYVGGPTCSVIALKCPNIKVTV 360
           +I KI  +G G +G  +   I+   PN K+TV
Sbjct: 4   IIPKIAIIGEGVIGCTSALQISKAIPNAKITV 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,368
Number of Sequences: 27780
Number of extensions: 267091
Number of successful extensions: 686
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)