Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021814X
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.93 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.93 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 238 RLCLKVPEMVIQKICCLGAGYVG 306
           RLC KV + ++  + CL   ++G
Sbjct: 411 RLCEKVAKQLVNSVNCLRESFIG 433


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 238 RLCLKVPEMVIQKICCLGAGYVG 306
           RLC KV + ++  + CL   ++G
Sbjct: 449 RLCEKVAKQLVNSVNCLRESFIG 471


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
 Frame = -3

Query: 523 TDININR---LPECFRR--CSLRKINFYLY-IRG 440
           T+I IN+   L +C     CSLRK+N  L+ IRG
Sbjct: 63  TNIGINKWRFLLQCLEDLDCSLRKLNSRLFVIRG 96


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 45  PVNKSPRPLTAQR 83
           P+N +P+PLT Q+
Sbjct: 220 PLNPNPQPLTGQQ 232


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 214 FIVVL*AWRLCLKVPEMV 267
           FI+V+    LCL VP+ +
Sbjct: 174 FIIVIWLLALCLAVPQAI 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,032
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)