Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021813
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein. 49 1e-05
D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1 p... 49 1e-05
BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein. 49 1e-05
BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for IM... 49 1e-05
AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1... 49 1e-05
BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein. 48 3e-05
AB065858-1|BAC06076.1| 335|Homo sapiens seven transmembrane hel... 32 1.8
AB065800-1|BAC06019.1| 325|Homo sapiens seven transmembrane hel... 32 2.4
BC111722-1|AAI11723.1| 312|Homo sapiens OR52A1 protein protein. 30 7.3
AF289204-1|AAG42367.1| 312|Homo sapiens odorant receptor HOR3'b... 30 7.3
AF154673-1|AAD51279.1| 312|Homo sapiens olfactory receptor HPFH... 30 7.3
>U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein.
Length = 399
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 137 RRTSRV*EANERRVRSREMAQSECTNEEDKISKSPRGIFPGTKAVDALLTSKWAT---GK 307
+R V E ++ + + C + + F +KAVD LL SKWA G+
Sbjct: 9 KRIQEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGE 68
Query: 308 NPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
FTTR V Y +R+L + FHRA KV
Sbjct: 69 EALFTTRESVVDYCNRLLKKQFFHRALKV 97
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 556 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTI 675
+LE H +QVFLD + YVWIYDP + +V G+++V I
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVI 208
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 AVAKWLKANVPTKKTKFLNHHVEYF 254
AVAK+L+ N PTK T + H V+YF
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYF 47
>D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1
protein.
Length = 399
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 137 RRTSRV*EANERRVRSREMAQSECTNEEDKISKSPRGIFPGTKAVDALLTSKWAT---GK 307
+R V E ++ + + C + + F +KAVD LL SKWA G+
Sbjct: 9 KRIQEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGE 68
Query: 308 NPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
FTTR V Y +R+L + FHRA KV
Sbjct: 69 EALFTTRESVVDYCNRLLKKQFFHRALKV 97
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 556 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTI 675
+LE H +QVFLD + YVWIYDP + +V G+++V I
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVI 208
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 AVAKWLKANVPTKKTKFLNHHVEYF 254
AVAK+L+ N PTK T + H V+YF
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYF 47
>BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein.
Length = 399
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 137 RRTSRV*EANERRVRSREMAQSECTNEEDKISKSPRGIFPGTKAVDALLTSKWAT---GK 307
+R V E ++ + + C + + F +KAVD LL SKWA G+
Sbjct: 9 KRIQEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGE 68
Query: 308 NPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
FTTR V Y +R+L + FHRA KV
Sbjct: 69 EALFTTRESVVDYCNRLLKKQFFHRALKV 97
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 556 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTI 675
+LE H +QVFLD + YVWIYDP + +V G+++V I
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVI 208
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 AVAKWLKANVPTKKTKFLNHHVEYF 254
AVAK+L+ N PTK T + H V+YF
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYF 47
>BC003677-1|AAH03677.1| 169|Homo sapiens Unknown (protein for
IMAGE:3932691) protein.
Length = 169
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 137 RRTSRV*EANERRVRSREMAQSECTNEEDKISKSPRGIFPGTKAVDALLTSKWAT---GK 307
+R V E ++ + + C + + F +KAVD LL SKWA G+
Sbjct: 9 KRIQEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGE 68
Query: 308 NPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
FTTR V Y +R+L + FHRA KV
Sbjct: 69 EALFTTRESVVDYCNRLLKKQFFHRALKV 97
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 AVAKWLKANVPTKKTKFLNHHVEYF 254
AVAK+L+ N PTK T + H V+YF
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYF 47
>AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1
protein.
Length = 399
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 137 RRTSRV*EANERRVRSREMAQSECTNEEDKISKSPRGIFPGTKAVDALLTSKWAT---GK 307
+R V E ++ + + C + + F +KAVD LL SKWA G+
Sbjct: 9 KRIQEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSKWAKAKKGE 68
Query: 308 NPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
FTTR V Y +R+L + FHRA KV
Sbjct: 69 EALFTTRESVVDYCNRLLKKQFFHRALKV 97
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 556 RLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTI 675
+LE H +QVFLD + YVWIYDP + +V G+++V I
Sbjct: 169 KLEPHDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVI 208
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 180 AVAKWLKANVPTKKTKFLNHHVEYF 254
AVAK+L+ N PTK T + H V+YF
Sbjct: 23 AVAKYLRFNCPTKSTNMMGHRVDYF 47
>BC105971-1|AAI05972.1| 104|Homo sapiens TLOC1 protein protein.
Length = 104
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +2
Query: 251 FPGTKAVDALLTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 394
F +KAVD LL SKWA G+ FTTR V Y +R+L + FHRA KV
Sbjct: 9 FIASKAVDCLLDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 59
>AB065858-1|BAC06076.1| 335|Homo sapiens seven transmembrane helix
receptor protein.
Length = 335
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -2
Query: 237 DLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHLCVF*SFFYQPLYVKFAH 76
D+ +++ S +H L A+ RL + + S+ L SH+CV F+ L+ FA+
Sbjct: 229 DIMLITVSYIHILQAVFRLLS-QDARSKALSTCGSHICVILLFYVPALFSVFAY 281
>AB065800-1|BAC06019.1| 325|Homo sapiens seven transmembrane helix
receptor protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 237 DLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHLCVF*SFFYQPLYVKFAHVSQNNK 58
D+ +++ S VH L A+ RL T ++L SH+CV +F+ L+ H N
Sbjct: 211 DITVIALSYVHILCAVFRLPT-HEARLKSLSTCGSHVCVILAFYTPALFSFMTHCFGRNV 269
Query: 57 TQF 49
++
Sbjct: 270 PRY 272
>BC111722-1|AAI11723.1| 312|Homo sapiens OR52A1 protein protein.
Length = 312
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -2
Query: 306 LPVAHFEVNKASTAFVPGNIPRGDLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHL 127
L A+ +VNK FV + DL ++ S + + RL + + +H+
Sbjct: 190 LAAANVQVNKIYGLFVAFTVAGFDLTFITLSYIQIFITVFRLPQ-KEARFKAFNTCIAHI 248
Query: 126 CVF*SFFYQPLYVKFAH 76
CVF F+ + F H
Sbjct: 249 CVFLQFYLLAFFSFFTH 265
>AF289204-1|AAG42367.1| 312|Homo sapiens odorant receptor
HOR3'beta4 protein.
Length = 312
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -2
Query: 306 LPVAHFEVNKASTAFVPGNIPRGDLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHL 127
L A+ +VNK FV + DL ++ S + + RL + + +H+
Sbjct: 190 LAAANVQVNKIYGLFVAFTVAGFDLTFITLSYIQIFITVFRLPQ-KEARFKAFNTCIAHI 248
Query: 126 CVF*SFFYQPLYVKFAH 76
CVF F+ + F H
Sbjct: 249 CVFLQFYLLAFFSFFTH 265
>AF154673-1|AAD51279.1| 312|Homo sapiens olfactory receptor HPFH1OR
protein.
Length = 312
Score = 30.3 bits (65), Expect = 7.3
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -2
Query: 306 LPVAHFEVNKASTAFVPGNIPRGDLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHL 127
L A+ +VNK FV + DL ++ S + + RL + + +H+
Sbjct: 190 LAAANVQVNKIYGLFVAFTVAGFDLTFITLSYIQIFITVFRLPQ-KEARFKAFNTCIAHI 248
Query: 126 CVF*SFFYQPLYVKFAH 76
CVF F+ + F H
Sbjct: 249 CVFLQFYLLAFFSFFTH 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,086,030
Number of Sequences: 237096
Number of extensions: 1858175
Number of successful extensions: 8210
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8204
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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