Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021813
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003520-1|AAO39524.1|  415|Drosophila melanogaster RE23984p pro...    66   3e-11
AE014134-1753|AAF52848.1|  428|Drosophila melanogaster CG4758-PB...    66   3e-11
AE014134-1752|AAF52847.1|  415|Drosophila melanogaster CG4758-PA...    66   3e-11
Z38100-1|CAA86222.1|  402|Drosophila melanogaster Drosophila tra...    66   6e-11
BT011359-1|AAR96151.1|  636|Drosophila melanogaster RE68639p pro...    33   0.30 
BT028789-1|ABI34170.1|  322|Drosophila melanogaster IP10585p pro...    30   3.6  
AE014297-4337|AAF56864.1|  322|Drosophila melanogaster CG14511-P...    30   3.6  
BT001494-1|AAN71249.1|  300|Drosophila melanogaster LD30465p pro...    29   8.4  
AE014297-4459|AAF56957.1|  352|Drosophila melanogaster CG7824-PA...    29   8.4  

>BT003520-1|AAO39524.1|  415|Drosophila melanogaster RE23984p
           protein.
          Length = 415

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 251 FPGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKVPV 400
           F  +KA+DALL SK+  G NP FTTR +V  +L  ML HK FHRAKKVPV
Sbjct: 55  FTSSKAIDALLKSKFTEGSNPLFTTREQVIEFLDVMLEHKFFHRAKKVPV 104



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +1

Query: 553 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVC 684
           IRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++ G + +C
Sbjct: 169 IRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGIC 212



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 VAKWLKANVPTKKTKFLNHHVEYF 254
           VAKWLK NV TKKTKFL+H VEYF
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYF 55


>AE014134-1753|AAF52848.1|  428|Drosophila melanogaster CG4758-PB,
           isoform B protein.
          Length = 428

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 251 FPGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKVPV 400
           F  +KA+DALL SK+  G NP FTTR +V  +L  ML HK FHRAKKVPV
Sbjct: 68  FTSSKAIDALLKSKFTEGSNPLFTTREQVIEFLDVMLEHKFFHRAKKVPV 117



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +1

Query: 553 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVC 684
           IRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++ G + +C
Sbjct: 182 IRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGIC 225



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 VAKWLKANVPTKKTKFLNHHVEYF 254
           VAKWLK NV TKKTKFL+H VEYF
Sbjct: 45  VAKWLKKNVKTKKTKFLSHIVEYF 68


>AE014134-1752|AAF52847.1|  415|Drosophila melanogaster CG4758-PA,
           isoform A protein.
          Length = 415

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 251 FPGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKVPV 400
           F  +KA+DALL SK+  G NP FTTR +V  +L  ML HK FHRAKKVPV
Sbjct: 55  FTSSKAIDALLKSKFTEGSNPLFTTREQVIEFLDVMLEHKFFHRAKKVPV 104



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +1

Query: 553 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVC 684
           IRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++ G + +C
Sbjct: 169 IRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGIC 212



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 VAKWLKANVPTKKTKFLNHHVEYF 254
           VAKWLK NV TKKTKFL+H VEYF
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYF 55


>Z38100-1|CAA86222.1|  402|Drosophila melanogaster Drosophila
           translocation protein 1 protein.
          Length = 402

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = +2

Query: 251 FPGTKAVDALLTSKWATGKNPAFTTRIEVTHYLHRMLLHKLFHRAKKVPV 400
           F  +KA+DAL+ SK+  G NP FTTR +V  +L  ML HK FHRAKKVPV
Sbjct: 55  FTSSKAIDALMKSKFTEGSNPLFTTREQVIEFLDVMLEHKFFHRAKKVPV 104



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +1

Query: 553 IRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVC 684
           IRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++ G + +C
Sbjct: 169 IRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGIC 212



 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 VAKWLKANVPTKKTKFLNHHVEYF 254
           VAKWLK NV TKKTKFL+H VEYF
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYF 55


>BT011359-1|AAR96151.1|  636|Drosophila melanogaster RE68639p
           protein.
          Length = 636

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -1

Query: 394 DLLGPVEEFMQKHTMQVMSHFDSCGE-RWILAGRPF*SQQGIYSLCTWKYSTW*FRNFVF 218
           +L GPV+EF ++  +Q+    +  G  RW LAG         Y  C WK   W     V+
Sbjct: 222 ELTGPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVWILCY-FCIWKGVKW-TGKVVY 279

Query: 217 FVGTF 203
           F   F
Sbjct: 280 FTALF 284


>BT028789-1|ABI34170.1|  322|Drosophila melanogaster IP10585p
           protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 583 FLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCNV 690
           F+  V + V+  +P  W++W+   LV  GT+   NV
Sbjct: 282 FISLVFSIVYFRNPFTWWHWLGTALVFVGTLMFANV 317


>AE014297-4337|AAF56864.1|  322|Drosophila melanogaster CG14511-PA
           protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 583 FLDTVDAYVWIYDPKPWYYWVCGILVVFGTITVCNV 690
           F+  V + V+  +P  W++W+   LV  GT+   NV
Sbjct: 282 FISLVFSIVYFRNPFTWWHWLGTALVFVGTLMFANV 317


>BT001494-1|AAN71249.1|  300|Drosophila melanogaster LD30465p
           protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 106 KERLKNAKMTSENLQSLRSQRAKSTQSRNGSKRMYQRRRQN 228
           KE  + A+  ++ +++  ++ AKS  +R   K+  +R++QN
Sbjct: 15  KEMSRRARARAKKIRNTEARAAKSVVTRGAGKKARKRKKQN 55


>AE014297-4459|AAF56957.1|  352|Drosophila melanogaster CG7824-PA,
           isoform A protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 106 KERLKNAKMTSENLQSLRSQRAKSTQSRNGSKRMYQRRRQN 228
           KE  + A+  ++ +++  ++ AKS  +R   K+  +R++QN
Sbjct: 67  KEMSRRARARAKKIRNTEARAAKSVVTRGAGKKARKRKKQN 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,365,270
Number of Sequences: 53049
Number of extensions: 517280
Number of successful extensions: 1630
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)