Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021812
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -1

Query: 446 QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT 357
           Q  ++W+ PS+Y  SP    R+ +PS + +S +
Sbjct: 183 QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS 215


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -1

Query: 446 QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT 357
           Q  ++W+ PS+Y  SP    R+ +PS + +S +
Sbjct: 75  QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS 107


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 705 KNVSVKELCRGYVAGDSKNNPPKGCCRFYSSSHC 604
           K V +K+LC      D  N+    C   YS S+C
Sbjct: 148 KVVPLKKLCNNGTCEDIGNSHRCHCSDGYSGSYC 181


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 701 TCPSRNCVVVMLLVTPKTTHLKGA 630
           TCP+    +++ +V P+   +KGA
Sbjct: 165 TCPAIGSAILIFVVLPELDVVKGA 188


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 701 TCPSRNCVVVMLLVTPKTTHLKGA 630
           TCP+    +++ +V P+   +KGA
Sbjct: 165 TCPAIGSAILIFVVLPELDVVKGA 188


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 233 TIFHTTAILH 204
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 458 LMDFGLTSVDLPVRRSTFL*FLQICRQCGQCGNPRLVCNRLRFD 589
           L+ F +TSV + V    ++  + IC    +C     +   L FD
Sbjct: 714 LLLFKITSVMIAVSGLVYIATVWICTLMNRCKFSEFMTKLLEFD 757


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 233 TIFHTTAILH 204
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 233 TIFHTTAILH 204
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,282
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)