Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021811
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39) 52 6e-07
SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052) 40 3e-06
SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12) 47 1e-05
SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 32 0.40
SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1) 32 0.53
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_19775| Best HMM Match : Arm (HMM E-Value=0.27) 30 2.1
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 30 2.1
SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4) 29 4.9
SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1) 29 4.9
SB_7358| Best HMM Match : bZIP_1 (HMM E-Value=1.7) 29 4.9
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 29 4.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21917| Best HMM Match : CXC (HMM E-Value=0.22) 28 6.5
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.5
SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_4520| Best HMM Match : Tsg (HMM E-Value=7.8) 28 6.5
SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05) 28 8.6
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 28 8.6
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 28 8.6
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 28 8.6
SB_38912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39)
Length = 401
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWP 639
R+GREVA RM ++G+ IG+DP VS A+ + ME E IWP
Sbjct: 18 RIGREVALRMQSYGVKTIGYDPLVSPQDAAESNIEWMETEKIWP 61
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/85 (31%), Positives = 35/85 (41%)
Frame = +2
Query: 458 YTGSELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPRWSWRTFG 637
+ G+EL GKTLAI+GLG L A S
Sbjct: 1 FMGNELFGKTLAIIGLGRIGREVALRMQSYGVKTIGYDPLVSPQDAAESNIEWMETEKIW 60
Query: 638 LLADYITLHTPLIESTRNFINARCL 712
LADYIT+H PLI T+ +N + +
Sbjct: 61 PLADYITVHVPLIPPTKGMLNDKTI 85
>SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052)
Length = 126
Score = 40.3 bits (90), Expect(2) = 3e-06
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 57 VDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIP 185
+++K VLI D V + C +L G+ K+SKEEL+ EIP
Sbjct: 4 LELKRVLISDSVDSCCKTILERNGVTVDVNTKLSKEELVSEIP 46
Score = 28.7 bits (61), Expect(2) = 3e-06
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 189 HDALVVRSATQVTKEVLDAG 248
+D L+VRSAT+V+++V+ AG
Sbjct: 77 YDGLIVRSATKVSEDVIKAG 96
>SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12)
Length = 189
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPA-STALKAGRWDRALYT 463
D ID+ +A K+G+ V N PG ++ L+L ARH+V + K G +++
Sbjct: 80 DRIDIPAATKRGIRVGNTPGVVQDCTADMAIGLLLASARHIVTGDANTRKPGFTKESIFN 139
Query: 464 --GSELAGKTLAILGLG--GSA 517
G+ + G TL I+GLG GSA
Sbjct: 140 CFGTRVTGSTLGIVGLGAVGSA 161
>SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTAL-KAGRWDRAL-- 457
DNID+++A ++G+ V N PG + A + L++ AR+V+ A + K G ++
Sbjct: 84 DNIDLEAAKRRGILVGNTPGISDCLA-DFAWALLMAAARNVIQADAMMRKPGFKIPSIIN 142
Query: 458 YTGSELAGKTLAILGLG 508
+ G+ ++G TL I+GLG
Sbjct: 143 WHGTRVSGATLGIIGLG 159
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 372 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 259
SS +++ +L TP+ P+ ST LSTP P++P+T
Sbjct: 196 SSSSITTTKLSSLSTPSLSTPSLSTPSLSTPLPSKPST 233
>SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1)
Length = 186
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 101 VCRTPQRLRNRHHHQGQDLQGRTSYGDTQPR 193
+CR+ + RHHH L G +SYG P+
Sbjct: 113 LCRSKRPYGLRHHHHASGLMGASSYGMAMPK 143
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -2
Query: 489 RVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLP 310
R+ P RA L A +A AGT +R++ +V ++S + + +TP F P
Sbjct: 560 RITTKKKTPPRRANL-LEALTAAAAGTPAASRSSSSVSLASPGMRSSLGSLQLTPPSFTP 618
Query: 309 AESTSMLSTPAPAR 268
S S + P +
Sbjct: 619 RSSISRRRSDTPTK 632
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARPTTFTSRLR-PTPLWS 223
TPTP P+ + +TP PA PT T + PTP S
Sbjct: 53 TPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARPTTFTSRLRPTP 232
TPTP P +TS L+ P PA T T +PTP
Sbjct: 78 TPTPKTPTPTTSTLTKPTPATTPTPT---KPTP 107
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 327 PTPFLPAESTSMLSTPAPARPTTFTSRL-RPTP 232
PT P +T +TP P PT TS L +PTP
Sbjct: 64 PTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTP 96
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARPT-TFTSRLRPTP 232
TPTP P +T + P+P PT T ++ PTP
Sbjct: 23 TPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTP 56
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARPT-TFTSRLRPTP 232
TPT P ++T +TP+P PT T + PTP
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTP 76
>SB_19775| Best HMM Match : Arm (HMM E-Value=0.27)
Length = 607
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = -2
Query: 603 ELGALISRHERVESDDVHAEGVHPSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSA 424
E G +R R+ S V S + R R+ PASS A+S +P +
Sbjct: 89 EQGGTFNRSRRIPSKRKSQTSV--SSEFKVEEKRFVRNRLKPASSRQEDSAKSIVPDNNK 146
Query: 423 VEAGTTWRARTNINVQVSSHALSALAPGALITPTPF--LPAESTSMLSTPAPA 271
++ ++ T +N + S+H+ + + A + TP LP +STS S+ A
Sbjct: 147 STTVSSCKSTTAVNSRTSTHSAGSKSSSAAYSRTPASGLP-KSTSTSSSKVTA 198
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 366 HALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRP 238
HA A AP + P P PA STS + TP+P P ++ P
Sbjct: 304 HAPIARAP--IARPLPTSPACSTSRIYTPSPLPPPLLKAKSEP 344
>SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4)
Length = 246
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 354 ALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTP 232
A AP + + + P S+ LS+P P P+T +S L P P
Sbjct: 145 AYAPSSTPSSSLLPPPSSSPPLSSPPPPPPSTPSSSLLPPP 185
>SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1)
Length = 114
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = -2
Query: 372 SSHALSALAPG---ALITPTPFLP-AESTSMLSTPAPARPTTFTSR 247
S +A +A+A G A +TP+ P A STS + + A ARPTT ++
Sbjct: 22 SINATTAIATGTFSATVTPSKTSPVAMSTSAVFSTAAARPTTVNTK 67
>SB_7358| Best HMM Match : bZIP_1 (HMM E-Value=1.7)
Length = 227
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 375 VSSHALSALAPGALITPTPFLPAESTSMLST-PAPARPTTFTSRLRPTPLWSLELLNAQP 199
+S H LA G PTP +PA + S+L AR T+ L P P + +L+
Sbjct: 155 LSPHESRLLAKGLKFIPTPPIPASNKSLLKDFKVFARCDFNTNTLIPNPSHTSSMLSLNG 214
Query: 198 ER 193
R
Sbjct: 215 NR 216
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -2
Query: 369 SHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFTS--RLRPTPLWSL 220
+H + P + TP F+P + + P P R T +P P+ SL
Sbjct: 104 AHNMGVAGPSGMATPGTFIPPPPPGVFTPPPPYRTTAKPKGPTKKPPPMMSL 155
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.7 bits (61), Expect = 4.9
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Frame = -2
Query: 534 PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSAV-EAGTTWRARTNINVQVSSHAL 358
PS L + P A + S+ YRA +LP+ + E +T+RA + S++
Sbjct: 71 PSAPLLTERPSTYRAPLYLPSNTSTYRAPLYLPSTPLLTEHPSTYRATLLLTEHPSTYRA 130
Query: 357 SALAPGA-LITPTP-------FLP-AESTSMLSTPAPARPTTFTSRLRPTPLWSLELLNA 205
P A L+T P +LP A ST RP+T+ + P L S LL
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRA---PLYLPSTPLLTK 187
Query: 204 QP 199
+P
Sbjct: 188 RP 189
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 110 TPQRLRNRHHHQGQDLQG 163
TPQ+L HH++G D+QG
Sbjct: 254 TPQKLPFHHHNKGYDIQG 271
>SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 522 LAADPPRPRMARVLPASSLPVY 457
LAAD P P +R P+S PVY
Sbjct: 182 LAADVPTPWFSRTAPSSDAPVY 203
>SB_21917| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 470
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 302 DSAGKKGVGVINAPGANALSACELTCTLML 391
D G+ GV V +APG C++ CT L
Sbjct: 235 DEMGRAGVTVEHAPGDADYKICQMACTYAL 264
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 409 GPSFHCAEGWQVGPGS--VHWQRARWQDPRHPWPWRVGREVATRMYAFGMNIIGFDPFVS 582
GPSF A + PG+ ++ Q A+ H WPW++ R ++ G +I V+
Sbjct: 13 GPSFVDAACGRKPPGARVINGQNAQ----PHSWPWQISLRPYGRYHSCGGTLISDRWVVT 68
Query: 583 ADQC 594
A C
Sbjct: 69 ASHC 72
>SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 375 VSSHALSALAPGALITPTPFLPAESTSML 289
+S H L LA G PTP +PA + S+L
Sbjct: 163 LSPHELRLLAKGLKFIPTPPIPASNKSLL 191
>SB_4520| Best HMM Match : Tsg (HMM E-Value=7.8)
Length = 594
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +1
Query: 364 VRADLHVDVGSGSPR--GPSFHCAEGWQVGPGSVH-WQRARWQDP---RHPW-PWRVG 516
VR ++ G G+ GPS AEG ++GP +VH A W++P R P PW G
Sbjct: 328 VRGPFNLSHGPGNRNRYGPSLVHAEGLRLGPKTVHRILHAVWKNPPRGRVPLAPWTNG 385
>SB_51704| Best HMM Match : F-box (HMM E-Value=3.3e-05)
Length = 337
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 484 DPRHPWP-WRVGREVATRMYAFGMNIIGFDPF 576
DPRH ++VG + R Y +G I G+DPF
Sbjct: 235 DPRHSKVIYKVGMVMRHRRYHYGCVIWGWDPF 266
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 102 CAELLNAYGIATTTKAKISKEELLMEIPNHDALVV 206
C L N Y A+T++ K SKE+++ ++ +VV
Sbjct: 3040 CQTLNNTYSPASTSRVKASKEQIISANSSYAEIVV 3074
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -2
Query: 393 TNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRP 238
T ++V + + + + G L+TP P+LPA ++ T P+T+ P
Sbjct: 492 TCVDVNAALGLVVSGSQGKLLTPFPYLPAAEYTLPLTSRLIHPSTYKPLYTP 543
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 27.9 bits (59), Expect = 8.6
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
Frame = -2
Query: 597 GALISRHERVESDDVHAEGVH-PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSAV 421
G +SR D + AEG P L + + P S++ S + +
Sbjct: 449 GTTVSREGTNTPDSLLAEGTTAPGTTLGNESTVVPGTTISPESTV---EPESTIATVISA 505
Query: 420 EAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLR 241
GTT + + + ++ + S +APG ++P + A T++ S R T S +
Sbjct: 506 APGTTESSESTVESLTTAASESTVAPGTTLSPESTV-APGTTVTSESTVTRGATVASAIT 564
Query: 240 PTP 232
P
Sbjct: 565 DAP 567
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 467 CQCTEPGPTCQPSAQWKLGPRGEPEPTSTCRSARTRS 357
C TEP P Q S+ K PE +++ S T S
Sbjct: 168 CSTTEPAPQDQVSSSCKTTETSRPETSTSATSEETNS 204
>SB_38912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 116 QRLRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSS 223
+R ++R DL +GD QPRRS F NSS
Sbjct: 87 RRTKSRSSSLKDDLSPFLVFGDWQPRRSERIFINSS 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,788,938
Number of Sequences: 59808
Number of extensions: 501687
Number of successful extensions: 1830
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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