Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021811
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 38 0.007
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 33 0.15
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 31 0.61
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 31 1.1
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 31 1.1
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 1.9
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.9
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 2.5
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.5
AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai... 29 2.5
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 29 2.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.5
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 4.3
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 29 4.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 5.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 5.7
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 7.6
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 100 bits (239), Expect = 1e-21
Identities = 56/142 (39%), Positives = 75/142 (52%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
DNIDV +A + V+N P AN+ SA ELTCTL+L L+RHV A+ ++KAG+W R + G
Sbjct: 81 DNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMG 140
Query: 467 SELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPRWSWRTFGLLA 646
E+ G+TLA+LGLG + + A + S A
Sbjct: 141 EEVYGRTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIWPQA 200
Query: 647 DYITLHTPLIESTRNFINARCL 712
DYIT+H PLI+ T N IN L
Sbjct: 201 DYITVHVPLIKQTENLINKETL 222
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +3
Query: 51 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 230
M I VLI D + +C ++L GI T K K +K+ELL+ +P HDA++VRSAT++T
Sbjct: 1 MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60
Query: 231 EVLDA 245
E+L A
Sbjct: 61 ELLAA 65
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPSS 645
R+G EVA R+ AFGM +IGFDP V+ +Q + + LE IWP +
Sbjct: 155 RIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIWPQA 200
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -2
Query: 498 RMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSAL-APGALITPT 322
R+AR LPA LP R++L A A ++ I + + L+ L +PGA T
Sbjct: 168 RLARGLPAPPLPEGLHRTNLSVIGATSAQPE-KSEAEIALSLPVPPLTPLPSPGAQSTAP 226
Query: 321 PFLPAESTSMLSTPAPARP 265
P P + + STP P P
Sbjct: 227 PVFPTSTPTPTSTPTPLLP 245
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 33.5 bits (73), Expect = 0.15
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 8/150 (5%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR----HVVPASTALKAGRWD-- 448
DNIDV +A + G+ V +APG + T +L+L L R H S K D
Sbjct: 254 DNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFRRTYWHAKSYSETRKTIGADQV 313
Query: 449 RALYTGS-ELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPR-WS 622
R GS ++ G L ILG G L + R ++
Sbjct: 314 RENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERVYT 373
Query: 623 WRTFGLLADYITLHTPLIESTRNFINARCL 712
F +D I+LH L + TR INA L
Sbjct: 374 MDEFMSRSDCISLHCNLGDETRGIINADSL 403
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFV 579
RVG V R AFG++II +DPFV
Sbjct: 335 RVGTAVGLRARAFGLHIIFYDPFV 358
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 524 TSRPTRQGQGWRGSCQRARCQCTEPGPTCQPS-AQWKLGPRGEPEPTSTCRSARTRSAHW 348
T RPT G W T GPT +P+ A W+ G G TS + R +A W
Sbjct: 371 TQRPTTAG--WTNGANGTTID-TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGW 427
Query: 347 R 345
R
Sbjct: 428 R 428
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 396 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARP 265
R+N ++ SS + P A P P +PA + + STP PA P
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPP 192
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 396 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARP 265
R+N ++ SS + P A P P +PA + + STP PA P
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPP 552
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 473 ARCQCTEPGPTCQPSAQWKLGPRGEP 396
A CQC PTC P GP G+P
Sbjct: 92 AWCQCEPTKPTCPPGPPGPPGPAGQP 117
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 30.3 bits (65), Expect = 1.4
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = -2
Query: 570 VES-DDVHAEGVHPSGHLAADP-PRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRA 397
VES + ++ P G A++P P P A A++L A + PA A EA + A
Sbjct: 486 VESATEAPSDSAAPIGPAASEPAPAPIEAPATDAATLETAPAPAAEPA-PAAEAAAGYDA 544
Query: 396 RTNINVQVSSHALSA-----LAPGALITPTPFLPAESTSMLSTPAPARPTT 259
+++ + + A +A AP A TP P AE T PAPA T
Sbjct: 545 PSSVPEETPAPAPAADETPAPAPAAEETPAPAPAAEET---PAPAPAAEET 592
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 518 RPTRQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 396
+P GQ G G + C+ T P P CQP Q GP G+P
Sbjct: 109 KPGAPGQPGTPGRPPQQPCEPTTP-PPCQPCPQGPPGPPGQP 149
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = -2
Query: 534 PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 355
P A P A P P Y+A + PA S + A SSH
Sbjct: 1213 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1271
Query: 354 ALAPGALITPTPFLPA 307
AP A TPTP P+
Sbjct: 1272 IAAPQARFTPTPGAPS 1287
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = -2
Query: 534 PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 355
P A P A P P Y+A + PA S + A SSH
Sbjct: 1233 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1291
Query: 354 ALAPGALITPTPFLPA 307
AP A TPTP P+
Sbjct: 1292 IAAPQARFTPTPGAPS 1307
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 336 LITPTPFLPAESTSMLSTPAP-ARPTTFTSRLRPTP 232
LIT T P +T+ L TPAP + P+ S PTP
Sbjct: 122 LITETTTQPPTTTTTLETPAPESTPSMAPSHTDPTP 157
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 518 RPTRQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 396
RP GQ G G A C+ T P P C+P Q GP G P
Sbjct: 123 RPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 5 protein.
Length = 531
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 531 SGHLAADPPRPRM-ARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 355
+G++A P RPR+ AR L +L + A SAV A +W+ I+ + H
Sbjct: 71 AGNMAMAPLRPRVFARCLILKNLELIEAARIFFIDSAVTANVSWKCLFQIDENLKFHPWQ 130
Query: 354 AL 349
A+
Sbjct: 131 AM 132
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/94 (24%), Positives = 40/94 (42%)
Frame = -2
Query: 513 DPPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGAL 334
DPP + R + R+ +L A SA T ++++V V+ +LS PG L
Sbjct: 9 DPPPSEVPRKVQRKD----RSVRYLRALSAKNQERTANEHSSVDVAVTQASLSVPRPGIL 64
Query: 333 ITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTP 232
P+ E ++ P RP+ + + +P
Sbjct: 65 RLPSSDPGEEDPQPSTSSIPHRPSKWATVREKSP 98
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 518 RPTRQGQ-GWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 396
RP GQ G G A C+ T P P C+P Q GP G P
Sbjct: 123 RPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 585 SRHERVESDDVHAEGVHP 532
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 585 SRHERVESDDVHAEGVHP 532
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 467 CQCTEPGPTCQPSAQWKLGPRGEPEPT 387
CQC P C P G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -2
Query: 357 SALAPGALITPTPFLPAESTSML---STPAPARPTTFTSRLRPTPLWSLELLNAQ 202
S + ++IT +P+ P++STS + +TP+P P T + P+P S + + Q
Sbjct: 858 STSSGSSMITQSPY-PSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQ 911
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = -2
Query: 537 HPSGHLAADPPRPRMARVLPASSLP----VYRARSHLPAFSAVEAGTTWRARTNINVQVS 370
+P G + PP+ RM PA P + P + + A T Q
Sbjct: 813 YPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTP---QPL 869
Query: 369 SHALSALAPGALITPTPFLPAESTSMLSTPAPA 271
S + +AP PTP + + L+TP PA
Sbjct: 870 SSTMPVVAPSTSTQPTPTTGSYLANTLATPGPA 902
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 339 ALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTPLWSLELLNAQP 199
++ITPT FL STS P TT R TP+ + ++ +P
Sbjct: 302 SMITPTSFLDIPSTSSPMLPFQISTTTSPMLQRQTPILTPQMSPFKP 348
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 339 ALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTPLWSLELLNAQP 199
++ITPT FL STS P TT R TP+ + ++ +P
Sbjct: 342 SMITPTSFLDIPSTSSPMLPFQISTTTSPMLQRQTPILTPQMSPFKP 388
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -2
Query: 486 VLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPA 307
V P ++ + + P ++ + ++ A T+ N+ SS + PG T P A
Sbjct: 1171 VQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNM--SSIQSTTSVPGRRFTVQPVSQA 1228
Query: 306 ES--TSMLSTPAPARPTTFTSRLRPTP 232
ES +S +STP P TS P P
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVP 1255
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = -2
Query: 486 VLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPA 307
V P ++ + + P ++ + ++ A T+ N+ SS + PG T P A
Sbjct: 1171 VQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNM--SSIQSTTSVPGRRFTVQPVSQA 1228
Query: 306 ES--TSMLSTPAPARPTTFTSRLRPTP 232
ES +S +STP P TS P P
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVP 1255
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 327 PTPFLPAESTSMLSTPAPARPTTFTSRLRPT 235
PT LP +T+ +TP P TT T+ PT
Sbjct: 414 PTTPLPTTTTTTTTTPKPTTTTTTTTTPAPT 444
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 417 AGTTWRARTNINVQVSSHALSALAPGALITP-TPFLP-AESTSMLSTPAPARPTTFTSR 247
A T+ A TN+ + S P +P T P + STS S+PAP P T TSR
Sbjct: 241 ASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPT-TSR 298
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = -2
Query: 441 LPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 262
+P F+ + T + SS A P A+ TP P P S + AP P+
Sbjct: 2589 IPLFNEMSGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPETPS 2648
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,182,973
Number of Sequences: 27780
Number of extensions: 342407
Number of successful extensions: 1735
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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