Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021811
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 77 9e-15
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 77 1e-14
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 77 2e-14
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 54 7e-08
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 47 1e-05
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 44 1e-04
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 41 7e-04
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 38 0.005
At3g28790.1 68416.m03593 expressed protein 35 0.061
At4g00355.2 68417.m00049 expressed protein 31 1.00
At4g00355.1 68417.m00048 expressed protein 31 1.00
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 31 1.00
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 30 1.7
At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) simil... 30 1.7
At4g00355.3 68417.m00047 expressed protein 29 2.3
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 29 2.3
At4g31650.1 68417.m04495 transcriptional factor B3 family protei... 29 3.0
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 3.0
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 29 4.0
At1g49870.1 68414.m05591 expressed protein ; expression supporte... 29 4.0
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 28 5.3
At5g40690.1 68418.m04939 expressed protein 28 5.3
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 28 5.3
At3g22520.1 68416.m02846 expressed protein 28 5.3
At2g44440.1 68415.m05526 emsy N terminus domain-containing prote... 28 5.3
At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containi... 28 7.0
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 7.0
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 28 7.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 7.0
At3g48560.1 68416.m05302 acetolactate synthase, chloroplast / ac... 27 9.3
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 77.4 bits (182), Expect = 9e-15
Identities = 43/138 (31%), Positives = 67/138 (48%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A ++KAG+W+R+ Y G
Sbjct: 157 DNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVG 216
Query: 467 SELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPRWSWRTFGLLA 646
L GKTLA++G G A + S+ A
Sbjct: 217 VSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTA 276
Query: 647 DYITLHTPLIESTRNFIN 700
D+++LH PL +T+ N
Sbjct: 277 DFVSLHMPLTPATKKVFN 294
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 72 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGV 251
+L+ + +G LL +G + +S E+L ++ DAL+VRS T+VT+EV +A
Sbjct: 85 ILVTEKLGEAGVNLLREFGDVDCSY-DLSPEDLKKKVAESDALIVRSGTKVTREVFEA-A 142
Query: 252 K*RWSVV 272
K R VV
Sbjct: 143 KGRLKVV 149
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFVSADQ 591
+VG EVA R GM +I DP+ AD+
Sbjct: 231 KVGTEVARRAKGLGMTVISHDPYAPADR 258
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/138 (33%), Positives = 64/138 (46%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
DN+D+ +A + G V+NAP AN ++A E LM +AR+V A ++KAG W R Y G
Sbjct: 136 DNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGEWKRNKYVG 195
Query: 467 SELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPRWSWRTFGLLA 646
L GKTLA+LG G A + S+ A
Sbjct: 196 VSLVGKTLAVLGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLVSFDEALATA 255
Query: 647 DYITLHTPLIESTRNFIN 700
D+I+LH PL +T +N
Sbjct: 256 DFISLHMPLTPTTSKILN 273
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFVSADQ 591
+VG EVA R GM +I DP+ AD+
Sbjct: 210 KVGTEVARRAKGLGMRVIAHDPYAPADR 237
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +3
Query: 153 ISKEELLMEIPNHDALVVRSATQVTKEVLDA 245
++ EEL ++I DAL+VRS T+V +EV ++
Sbjct: 90 MTPEELNIKISLCDALIVRSGTKVGREVFES 120
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/138 (31%), Positives = 66/138 (47%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTG 466
DN+D+ +A + G V+NAP AN ++A E L+ +AR++ A ++KAG+W R Y G
Sbjct: 121 DNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGKWTRNKYVG 180
Query: 467 SELAGKTLAILGLGGSAARWPLGCXXXXXXXXXXXXXXXXXXAPSSIAPRWSWRTFGLLA 646
L GKTLA+LG G + A + S+ A
Sbjct: 181 VSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELVSFEVAISTA 240
Query: 647 DYITLHTPLIESTRNFIN 700
D+I+LH PL +T +N
Sbjct: 241 DFISLHLPLTAATSKMMN 258
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 69 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDA 245
++L+ + +G +LL Y + +S EEL +I DAL+VRS T+V ++V ++
Sbjct: 48 TILVTEKLGQAGIDLLKKYANVDCSY-DLSLEELCTKISLCDALIVRSGTKVGRDVFES 105
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 508 RVGREVATRMYAFGMNIIGFDPFVSADQ 591
+VG EVA R GM++I DP+ AD+
Sbjct: 195 KVGSEVARRARGLGMHVITHDPYAPADR 222
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAG---RWDRAL 457
+N+DV++A K G+ V N PG + EL +L L AR +V A ++ G W L
Sbjct: 98 NNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLYEGWLPHL 157
Query: 458 YTGSELAGKTLAILGLG--GSA 517
+ G+ L G+T+ ++G G GSA
Sbjct: 158 FVGNLLKGQTVGVIGAGRIGSA 179
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 460
D+ID+ +A G+ V G+N +S E +L+L R+ VP + G W+ A Y
Sbjct: 131 DHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAY 190
Query: 461 TGSELAGKTLAILGLG 508
+L GKT+ +G G
Sbjct: 191 RAYDLEGKTIGTVGAG 206
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALY-T 463
D ID+ +KG+ V N P +L L+L L R + +++G+W + +
Sbjct: 79 DKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLCECDRYVRSGKWKQGEFQL 138
Query: 464 GSELAGKTLAILGLG 508
++ +GK++ I+GLG
Sbjct: 139 TTKFSGKSVGIIGLG 153
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LY 460
D+ID+ + ++G+ + NA A + + L++ + R + A +++G W +
Sbjct: 86 DHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFGDFQ 145
Query: 461 TGSELAGKTLAILGLG 508
GS+++GK + I+GLG
Sbjct: 146 LGSKVSGKRVGIVGLG 161
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 287 DNIDVDSAGKKGVGVINAPG---ANALSACELTCTLMLVLARHVVPASTALKAGRWDRAL 457
D +D+D+A K G+ V P NA S E+ LML L + +L+
Sbjct: 127 DGVDIDAATKHGIKVARIPSEGTGNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP- 185
Query: 458 YTGSELAGKTLAILGLG 508
TG L GKT+ ILG G
Sbjct: 186 -TGDTLLGKTVFILGYG 201
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -2
Query: 357 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTP 232
S +P TPTP P ST STP P+ PT T PTP
Sbjct: 271 SGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPST----PTP 308
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -2
Query: 429 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFT 253
S +G T++ T + S P TPTP P ST STP P+ PT T
Sbjct: 255 SGGSSGNTYKDTTGSSSGASPSGSPTPTPS---TPTPSTPTPSTPTPSTPTPSTPTPST 310
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARP 265
TPTP P ST STPAP+ P
Sbjct: 295 TPTPSTPTPSTPTPSTPAPSTP 316
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 330 TPTPFLPAESTSMLSTPAPARPTTFT 253
TPTP P ST STP P+ P T
Sbjct: 290 TPTPSTPTPSTPTPSTPTPSTPAPST 315
>At4g00355.2 68417.m00049 expressed protein
Length = 266
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 460 HWQRARWQDPRHPWPWRVGREVATRM 537
HWQ+ RWQ + W +G E A R+
Sbjct: 212 HWQQERWQILQQKWESSIGNEKAGRL 237
>At4g00355.1 68417.m00048 expressed protein
Length = 266
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 460 HWQRARWQDPRHPWPWRVGREVATRM 537
HWQ+ RWQ + W +G E A R+
Sbjct: 212 HWQQERWQILQQKWESSIGNEKAGRL 237
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 71 GFDRRRGWRQVCRTPQR-LRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSS 223
G R+ RQ +R L N+HH++ QD+Q + Y Q G + S SS
Sbjct: 1165 GAGRKSRQRQPDLMKKRMLLNKHHNRNQDVQQQNIYSPLQKTSKGPSLSKSS 1216
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 511 PAKAKDGEGLASELAASVQSPVPPASLQRSGSWD 410
P G AS AA+ + P PP S RS WD
Sbjct: 246 PGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) similar
to glutamate decarboxylase (gad) GI:294111 from [Petunia
hybrida]
Length = 494
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 48 KMVVDIKSVLI-VDGVGAKCAELLNAYGIATTTKAKISKEELLMEI 182
++V DI VL +D + +K ++ + GIA K K ++E+LME+
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMGIEGIAENVKEKKMEKEILMEV 476
>At4g00355.3 68417.m00047 expressed protein
Length = 264
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 460 HWQRARWQDPRHPWPWRVGREV 525
HWQ+ RWQ + W +G EV
Sbjct: 212 HWQQERWQILQQKWESSIGNEV 233
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = -2
Query: 534 PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 355
PS A P +A P SS ++ A P+FS + + + +I S
Sbjct: 224 PSSATGATPSFS-VASSAPGSSSSIFGATGSSPSFSVASSASG--SSPSIFGATGSSPFF 280
Query: 354 ALAPGALITPTPFLPAESTSMLSTPAPARPTTFTS 250
+ A TP+ F + S + S+P+P +TF S
Sbjct: 281 GSSSSAGSTPSLFASSSSGATTSSPSPFGVSTFNS 315
>At4g31650.1 68417.m04495 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 493
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 246 GVK*RWSVVLELVWTTSTSTPPVKRASE*ST 338
GVK SVVLELVW +T+ P K S+ T
Sbjct: 463 GVKAYESVVLELVWEETTTLPMFKFCSKIKT 493
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 339 ALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTPLWSLELLNAQPERRGWVSP 175
AL TP P + T+ + PAP P TS P P + P ++G +P
Sbjct: 354 ALSASTPLTPGQFTTANAPPAPPGPANQTSPPPPPPPSAAAPPPPPPPKKGPAAP 408
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 327 PTPFLPAESTSMLSTPAPARPTTFTSRLRPTPL 229
P+P +P+ S S P P+ PT PTP+
Sbjct: 50 PSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPV 82
>At1g49870.1 68414.m05591 expressed protein ; expression supported
by MPSS
Length = 828
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 54 VVDIKSVLI---VDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQV 224
+ D++S+L+ V G+ + E + G K +++ L E+P+ D+ +V+ +++
Sbjct: 480 IPDLESLLVKKHVSGLEKEVQETIKNCGKMYENVKKPGRKDGLSEVPSLDSCLVKHFSKL 539
Query: 225 TKEVLDA 245
KEV +A
Sbjct: 540 EKEVQEA 546
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = -2
Query: 618 HLGAM--ELGALISRHERVESDDVHAEGVHPSGHLAADPPRPRMARVLPASSLPVYRAR- 448
HLGA+ ELG I S ++ P+ +++ P P M + P P++
Sbjct: 357 HLGALLLELGRTILTLRMAPSPELSYVNAGPAVYISPSGPNPIMVQPFPHQISPLFTGAT 416
Query: 447 -SHLPAFSAVEAGTTWRARTNINVQVSSHALSALAP 343
S P V GT A+ +IN+ + HA ++ +P
Sbjct: 417 VSSNPLTGPVGLGT---AQRHINIHI--HAGTSGSP 447
>At5g40690.1 68418.m04939 expressed protein
Length = 210
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 581 DTKGSNPMMFMPKAYILV-ATSRPTRQGQGWRGSCQRARCQCTEPGPTCQPSAQWK 417
++K NP+ P A + TS+PT + + G C +ARC P + A+ K
Sbjct: 26 ESKLVNPLTSRPTAGLFTKVTSKPTNHSK-FTGKCGQARCLDCHMHPVTKSKAKTK 80
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 327 PTPFLPAESTSMLSTPAPARPTTFTSRLRPTPL 229
P+P++P S S P P+ P+ PTP+
Sbjct: 55 PSPYVPTPSVPSPSVPTPSVPSPSVPSPNPTPV 87
>At3g22520.1 68416.m02846 expressed protein
Length = 600
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 478 WQDPRHPWPWRVGREVATRMY 540
W P W WRVGR V Y
Sbjct: 121 WPSPGDVWTWRVGRRVTAMGY 141
>At2g44440.1 68415.m05526 emsy N terminus domain-containing protein
/ ENT domain-containing protein contains Pfam profile
PF03735: ENT domain
Length = 429
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 534 PSGHLAADPPRPRMARVLPASSLPVYRARSHLPAF 430
PS H ADP P + +P+ + + H P F
Sbjct: 173 PSFHPQADPTHPFASSTAKRGPVPIVKGKKHKPVF 207
>At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein contains CBS and
PPR domain repeats
Length = 580
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 348 APGALITPTPFLPAESTSMLSTPAPARPTTFTSRLRPTPLWSLELLNAQPERRGWV 181
A L+TP P LP+ S P R T ++ R+ PL S +L + + G +
Sbjct: 6 AISTLVTPLPLLPSCSFVPTRRCYPRRATPYSRRINLKPLTSRIVLLTRRRQLGQI 61
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 449 GPTCQPSAQWKLGPRGEPEPTSTCRSARTR 360
GP + +W GPRG + ST S+R R
Sbjct: 954 GPPAEGGDRWGSGPRGSDDRRSTFGSSRPR 983
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 570 VESDDVHAEGVHPSGHLA--ADPPRPRMARVLPASSLPV 460
VE+ DV +GV P G + +P P A VL +P+
Sbjct: 606 VETHDVETDGVEPEGFVLEFVEPDDPSSAMVLYVPDVPI 644
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 345 PGALITPTPFLPAESTSMLSTPAPARPTTFTS-RLRPTP 232
PG+L TP LP S S TP+P PTT ++ R P+P
Sbjct: 70 PGSL---TPPLPQPSPSAPITPSPPSPTTPSNPRSPPSP 105
>At3g48560.1 68416.m05302 acetolactate synthase, chloroplast /
acetohydroxy-acid synthase (ALS) nearly identical to
SP|P17597 Acetolactate synthase, chloroplast precursor
(EC 2.2.1.6, formerly EC 4.1.3.18) (Acetohydroxy-acid
synthase) (ALS) {Arabidopsis thaliana}
Length = 670
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = -2
Query: 303 STSMLSTPAPARPT---TFTSRLRP-TPLWSLELLNAQPERRG 187
+T++ +TP+P +PT TF SR P P ++L ER+G
Sbjct: 69 TTNVTTTPSPTKPTKPETFISRFAPDQPRKGADILVEALERQG 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,634,527
Number of Sequences: 28952
Number of extensions: 323423
Number of successful extensions: 1164
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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