Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021810
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   0.99 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.2  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 408 VIKRPFTTLINFNVFVFRSVFLVLICFQLFSNLFL 512
           +IK+  T   N +VF+F +V+L ++   + S +FL
Sbjct: 138 IIKKNVTQQ-NSDVFIFDNVWLFILWVGILSTIFL 171


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 207 HSWRVSNVSRE*TGSPCTMSVTLTFDVS 124
           HSW + + S    G+P T  +   F  S
Sbjct: 251 HSWYLQSTSNHDVGAPATTGIAGPFTQS 278


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 513  IKKGWKTVGNR 481
            IKKGWK V +R
Sbjct: 2112 IKKGWKVVRDR 2122


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 205 QLARFECLS*INWLTVHDER 146
           QLARF+CLS   WL +   R
Sbjct: 389 QLARFKCLS---WLDLSYNR 405


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 187 IRNAPAVRYGGRATPSVRTRGN 252
           I N P+     R+TPS R  GN
Sbjct: 406 IANLPSPGSDQRSTPSPRVYGN 427


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,249
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)