Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021810
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U64833-5|AAK95860.1|  402|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ...    28   7.0  

>Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical
           protein B0035.5 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +2

Query: 275 CKS*ENQFLMCQVSIAYCSYVRSESASSRNYKVMQMSSERFYTRGNQKTIHNFNKL*CFR 454
           CK  EN+       I  CSYV+ +  +S  ++ +Q S + F    N + +   N+L    
Sbjct: 90  CKVRENEKCAFDDFIKKCSYVQGQYDTSEGFQRLQSSIDDFQKESNNQAV---NRLYYLA 146

Query: 455 VPFSFFS 475
           +P S F+
Sbjct: 147 LPPSVFN 153


>Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical
           protein C12D8.18 protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 290 NQFLMCQVSIAYCSYVRSESASSRNY 367
           ++FL+C ++IA CS VR  SA    Y
Sbjct: 41  SKFLLCVLAIAMCSIVREASAQYYGY 66


>Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = +1

Query: 82  GIRLRKSRDDIQVRADIERQGNAHRAR*ASLFTRDIRNAPAVRYGGRAT-PSVRTRGNKF 258
           G  +   R+ I      E+ G    +    L ++   NA  + +  +   PSVRT   K+
Sbjct: 35  GKMILTQREGIAATKSAEQSGAVVNSEGKLLCSQSSSNAQILLFANQLNEPSVRTTSLKY 94

Query: 259 THGYLLQVLRKPIFNVSSQYSLLQLRQIGERLEQELQGYAN 381
            +G+L      P   V+   S++  RQ+  R   +L+ + N
Sbjct: 95  DYGFLCATF--PEMGVTLN-SMVDRRQLATRYAIQLEVHLN 132


>Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = +1

Query: 82  GIRLRKSRDDIQVRADIERQGNAHRAR*ASLFTRDIRNAPAVRYGGRAT-PSVRTRGNKF 258
           G  +   R+ I      E+ G    +    L ++   NA  + +  +   PSVRT   K+
Sbjct: 35  GKMILTQREGIAATKSAEQSGAVVNSEGKLLCSQSSSNAQILLFANQLNEPSVRTTSLKY 94

Query: 259 THGYLLQVLRKPIFNVSSQYSLLQLRQIGERLEQELQGYAN 381
            +G+L      P   V+   S++  RQ+  R   +L+ + N
Sbjct: 95  DYGFLCATF--PEMGVTLN-SMVDRRQLATRYAIQLEVHLN 132


>U64833-5|AAK95860.1|  402|Caenorhabditis elegans Hypothetical
           protein B0507.10 protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -2

Query: 514 DKKRLENSWKQISTKKTERNTKTLKFIKVVNGLLITPGIESFRTHLHNLV 365
           D+KR+E   K++   +    +      +++  L I    E FR H  NL+
Sbjct: 180 DEKRIEEQKKRLEKIENRAFSGIANSAQLMTSLAIEDNFEQFRQHCRNLI 229


>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
            protein T22B11.5 protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 202  AVRYGGRATPSVRTRGNKFTHGYLLQVLRKPIFNV 306
            A +Y GR   S    GNKFTH    + +   +F V
Sbjct: 985  ATKYAGRLPSSSPATGNKFTHMQEQKEMMSKVFGV 1019


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,980,069
Number of Sequences: 27780
Number of extensions: 296646
Number of successful extensions: 823
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)