Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021807
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 124 2e-27
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 122 1e-26
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 116 4e-25
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 115 1e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 113 4e-24
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 109 5e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 103 3e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 101 1e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 101 2e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 100 4e-20
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 99 5e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 98 2e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 94 3e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 93 5e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 85 2e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 79 1e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 76 7e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 74 4e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 65 1e-09
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 57 4e-07
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 57 4e-07
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 56 6e-07
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 54 3e-06
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 50 4e-05
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 50 6e-05
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 48 2e-04
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 47 4e-04
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 46 7e-04
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 41 0.034
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.079
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 37 0.42
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 36 0.97
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.2
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 33 5.2
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 5.2
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 6.8
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 6.8
UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 6.8
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 33 9.0
UniRef50_UPI0000D9DBDF Cluster: PREDICTED: hypothetical protein;... 33 9.0
UniRef50_Q91TV9 Cluster: T4; n=1; Tupaiid herpesvirus 1|Rep: T4 ... 33 9.0
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=... 33 9.0
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 33 9.0
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 124 bits (299), Expect = 2e-27
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 2e-20
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 122 bits (293), Expect = 1e-26
Identities = 56/91 (61%), Positives = 61/91 (67%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
Q++GH+I+ FP
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 692 P 694
P
Sbjct: 210 P 210
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +1
Query: 67 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 246
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 247 AGHK 258
AGH+
Sbjct: 61 AGHQ 64
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 116 bits (280), Expect = 4e-25
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+ E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKG
Sbjct: 12 VSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKG 71
Query: 692 P 694
P
Sbjct: 72 P 72
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 115 bits (277), Expect = 1e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +1
Query: 100 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGH+
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 113 bits (272), Expect = 4e-24
Identities = 52/91 (57%), Positives = 55/91 (60%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 37 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQK 96
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH + P P
Sbjct: 97 RFATASALAASGSPALLMARGHNVSTVPEVP 127
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 512 IPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 682
+PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK+R RR Q
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQ 182
Query: 683 RKGP 694
R+GP
Sbjct: 183 RRGP 186
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 109 bits (263), Expect = 5e-23
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 60 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGH+
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = +2
Query: 509 KIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 679
++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHR 204
Query: 680 QRKGP 694
QR+GP
Sbjct: 205 QRRGP 209
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 103 bits (248), Expect = 3e-21
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 407
G +TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 253 HK 258
++
Sbjct: 60 YE 61
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ G
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 692 P 694
P
Sbjct: 207 P 207
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 101 bits (243), Expect = 1e-20
Identities = 52/103 (50%), Positives = 55/103 (53%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 398
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 399 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
RRWH ARGH I + P P
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIP 152
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RK
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRK 206
Query: 689 GP 694
GP
Sbjct: 207 GP 208
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 88 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAG 60
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 101 bits (241), Expect = 2e-20
Identities = 46/103 (44%), Positives = 56/103 (54%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 398
+A + G+ QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGY-QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 399 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
R WH +RGH +E P P
Sbjct: 108 RHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELP 150
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +1
Query: 79 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G++
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 664
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 100 bits (239), Expect = 4e-20
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = +3
Query: 261 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 440
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 441 XXXXXXXXXXXXXXXQARGHIIERFPNFP 527
+RGH I P P
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVP 150
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+G
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 692 P 694
P
Sbjct: 206 P 206
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 99 bits (238), Expect = 5e-20
Identities = 46/103 (44%), Positives = 58/103 (56%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 398
+A + + G+ QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGY-QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 399 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
RRWH +RGH IE P
Sbjct: 108 RRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVP 150
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +1
Query: 85 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G++
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
Score = 35.9 bits (79), Expect = 0.97
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 518 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGKGK 658
E+P+VV D +++INKTK AV L + +++ ++ K + R R G+ K
Sbjct: 148 EVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 98.3 bits (234), Expect = 2e-19
Identities = 48/91 (52%), Positives = 51/91 (56%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
Q SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 62 QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEK 121
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH I P P
Sbjct: 122 RHAVAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 253 HK 258
H+
Sbjct: 61 HQ 62
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQR 685
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 686 KGP 694
GP
Sbjct: 208 VGP 210
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/92 (45%), Positives = 52/92 (56%)
Frame = +3
Query: 258 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 437
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRK 116
Query: 438 XXXXXXXXXXXXXXXXQARGHIIERFPNFPWL 533
+RG+ ++ P P++
Sbjct: 117 SAIFSAIASSSIVSIIVSRGYRVKTIPEIPFV 148
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR + G
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTG 200
Query: 692 P 694
P
Sbjct: 201 P 201
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 93.5 bits (222), Expect = 5e-18
Identities = 43/91 (47%), Positives = 49/91 (53%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
Q SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 61 QHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQR 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH I+ P P
Sbjct: 121 RFAMCSAIAASSNPSLVLARGHKIDNVPELP 151
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G
Sbjct: 147 VPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRG 206
Score = 41.1 bits (92), Expect = 0.026
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 91 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGH+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 407
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +2
Query: 521 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKG 203
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +1
Query: 94 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAG 56
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/98 (44%), Positives = 52/98 (53%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFPWL*PTKS 548
ARGH I P P + +KS
Sbjct: 121 RFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 500 HY*KIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRR 676
H +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKI 202
Query: 677 IQRKGP 694
+RKGP
Sbjct: 203 KERKGP 208
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAG 59
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 667
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +3
Query: 252 SQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 431
+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKV 120
Query: 432 XXXXXXXXXXXXXXXXXXQARGHIIERFPNFPWL 533
+RGH ++ NFP +
Sbjct: 121 KVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 542 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 195 SRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 323
S + + + + E G+ QTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGY-QTSAESWGTGRARGPMPRVRGGG 73
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 178 DLVNDVHVSMSKNSRQPYCVSKEAGHK 258
D+VN VH ++ KN QPY VS+ AG++
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/91 (39%), Positives = 44/91 (48%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQR 117
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
QARGH++ P
Sbjct: 118 KFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R +K
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKK 202
Query: 689 GP 694
GP
Sbjct: 203 GP 204
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +1
Query: 79 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG K
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+G
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRG 209
Query: 692 P 694
P
Sbjct: 210 P 210
Score = 35.9 bits (79), Expect = 0.97
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 130 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 216
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I RKG
Sbjct: 10 VPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKG 69
Query: 692 P 694
P
Sbjct: 70 P 70
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/103 (34%), Positives = 44/103 (42%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQR 110
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFPWL*PTKSRRSTR 563
+ARGH I P+ P + T + T+
Sbjct: 111 RYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKG
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 692 P 694
P
Sbjct: 195 P 195
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +1
Query: 88 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAG 55
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/59 (37%), Positives = 40/59 (67%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPK 199
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXX 431
+TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKE 113
Query: 432 XXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
+ RGH+I+ P+ P
Sbjct: 114 RRAALRSALAATAKPEFVKERGHVIDDVPHLP 145
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 88 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFR 55
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +2
Query: 518 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPK 196
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 673
K+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 163 KVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/96 (30%), Positives = 40/96 (41%)
Frame = +3
Query: 240 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 419
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 420 XXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH++E+ P+ P
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +2
Query: 533 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 694
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGP
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGP 54
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/57 (35%), Positives = 38/57 (66%)
Frame = +2
Query: 518 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKK 192
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 524 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 694
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GP
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGP 203
Score = 34.7 bits (76), Expect = 2.2
Identities = 25/98 (25%), Positives = 38/98 (38%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 413
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 414 XXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
+ARGH+ + FP
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFP 147
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+ K
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPK 195
Query: 689 GP 694
GP
Sbjct: 196 GP 197
Score = 36.3 bits (80), Expect = 0.73
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
+T+AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKER 110
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFPWL 533
+ RGH + P++
Sbjct: 111 TLAIRSAIAATANKELVEQRGHQVSELEQIPFV 143
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 530 VVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGP 694
+V D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGP
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGP 207
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 40.7 bits (91), Expect = 0.034
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 198 RFYVQELEAALL---REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 368
R ++ E A L R+ +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 369 GRMFAPTK 392
GR P +
Sbjct: 101 GRAAHPPR 108
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 494 RTHY*KIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 670
R H LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 671 R 673
R
Sbjct: 202 R 202
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 39.5 bits (88), Expect = 0.079
Identities = 27/74 (36%), Positives = 32/74 (43%)
Frame = +2
Query: 203 LCPRTRGSPTA*ARRLVTNQCRIMGYRTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVR 382
L P RG P L ++G+R SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPVRHEPLGA----LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 383 PHEALAALASSRQP 424
E L LA QP
Sbjct: 155 ADEDLPPLAPQDQP 168
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 37.1 bits (82), Expect = 0.42
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 63 RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQ 242
R ++G P GV + R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG---GVGARRRGGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 380
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 35.9 bits (79), Expect = 0.97
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +3
Query: 279 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 458
TG ARI R++GGG R G+ RGGR P K + H
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124
Query: 459 XXXXXXXXXQARGHIIE 509
RGHII+
Sbjct: 125 AATASKSTVAGRGHIID 141
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 294 ARIPRVRGGGTHRSGQGAFGNMCRGG 371
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 366 HDTCYRRHPDRTYEYHHHGHAEFGRQH 286
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 216 LEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 338
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 33.5 bits (73), Expect = 5.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVRY 277
YRRH + YHHH H R H RY
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 5.2
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +2
Query: 284 TCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALASSRQPPTAESGLG 448
T CR +AC W W++ V +GC W + H R+P E L
Sbjct: 80 TGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSLH 139
Query: 449 GSRCCYRRPSTRS 487
G+ C P+ RS
Sbjct: 140 GAPSCLSTPAPRS 152
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 323
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 375 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 262
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 273
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 338
G WS+ AE G G AV R RV GGG G
Sbjct: 165 GSWSRPGAERRGAGMAVEREERVLGGGREVDG 196
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 32.7 bits (71), Expect = 9.0
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 401
R QGG A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_UPI0000D9DBDF Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 299
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 163 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHKPVPNHGVPDVLSPE 300
A R D + +++SRQP S+E G +P+P GV +PE
Sbjct: 224 ARARRGTAGDAANAAARSSRQPQIESREGGPRPLPRRGVRGPETPE 269
>UniRef50_Q91TV9 Cluster: T4; n=1; Tupaiid herpesvirus 1|Rep: T4 -
Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus
tupaia (strain1))
Length = 525
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 356 HVSWWTYVRPHEALAALASSRQPPTAESGLGGSRCCYRRPST 481
H + + Y P E+LA LA+ A GL S C YRRP T
Sbjct: 123 HAAIYVYDLPRESLA-LAAPHLDHLARFGLLNSECLYRRPET 163
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 381 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 289
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=2;
Eutheria|Rep: Chromosome 1 open reading frame 122 - Homo
sapiens (Human)
Length = 159
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 407
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 378 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIR 265
+Y H + RH R+Y + HH H R R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,146,823
Number of Sequences: 1657284
Number of extensions: 15223592
Number of successful extensions: 50226
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 46484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49784
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -