Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021807
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 121 5e-28
07_01_0578 + 4295386-4296489,4297394-4297507 119 3e-27
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.055
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 34 0.13
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.22
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 31 0.67
05_03_0163 + 9070781-9071320 31 0.67
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 31 0.89
02_01_0748 + 5566073-5567620 31 1.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 1.6
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 2.7
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 3.6
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 28 6.3
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 6.3
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 8.3
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 8.3
08_02_1285 - 25881091-25881798 28 8.3
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 8.3
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 121 bits (292), Expect = 5e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLR 123
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH IE P FP
Sbjct: 124 RIAVASALAATAVPSLVLARGHRIEGVPEFP 154
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKG
Sbjct: 150 VPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209
Query: 692 P 694
P
Sbjct: 210 P 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 253 HK 258
H+
Sbjct: 63 HQ 64
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 119 bits (286), Expect = 3e-27
Identities = 55/91 (60%), Positives = 58/91 (63%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLR 124
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH IE P P
Sbjct: 125 RVAVASALAATSVPSLVLARGHRIETVPELP 155
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +2
Query: 512 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 691
+PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKG
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210
Query: 692 P 694
P
Sbjct: 211 P 211
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +1
Query: 85 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 203
ASL N I +PTF +G K G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 203
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 203
ASL N I +PT +G K G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>05_03_0163 + 9070781-9071320
Length = 179
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 344
R GGWSQ AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 219 EAALLREQGGWSQTSAESWGTGRAV 293
EAALLR G W++ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>02_01_0748 + 5566073-5567620
Length = 515
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 383 PHEALAALASSRQPPTAESGLGGSRCCYRRPSTRSG*RTHY*KIPELPLVVADKV 547
PH L ++ SR P L S C P+T+SG + PELP+++ V
Sbjct: 439 PHVTLQSVTMSRSPERGIVSLQDS-CLVTPPATQSGDHCRRRRSPELPVLLCKSV 492
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 374
+++ A ++GG S S S G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 375 MFAPTKP-WR 401
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/83 (27%), Positives = 34/83 (40%)
Frame = +3
Query: 117 RDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVA 296
R AG + PP R G TSG G S + V+ + +S + + S+G G
Sbjct: 100 RHAAGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVAN 155
Query: 297 RIPRVRGGGTHRSGQGAFGNMCR 365
+ GGG R + N+ R
Sbjct: 156 SRAKGGGGGAPRGNETVIPNIIR 178
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 203
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 172 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHKPVPNHGVPD 285
RP + DV S S +S P SK++GH V HG D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 219 EAALLREQGG-WSQTSAE-SWGTGRAVARIPRVRGGGTHRSG 338
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 390 SWGRTYVHHDTCYRRHPDRTYEYHH 316
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>08_02_1285 - 25881091-25881798
Length = 235
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 111 KERDGAGCSQAPPVRVQGAHTSGPG 185
+E DG G ++A V +GAH +G G
Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 333 TYEYHH-HGHAEFGRQHVRYPMIRH 262
T+++HH HGH FGR H +P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHH 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,270,059
Number of Sequences: 37544
Number of extensions: 470426
Number of successful extensions: 1749
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1742
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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