Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021807
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 123 2e-28
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 37 0.014
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 37 0.018
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 35 0.056
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 33 0.30
SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 30 2.1
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 30 2.1
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 3.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 3.7
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 3.7
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 28 6.4
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 28 6.4
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_12491| Best HMM Match : rve (HMM E-Value=1.6e-18) 28 8.5
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 8.5
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 123 bits (296), Expect = 2e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 58 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQR 117
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
ARGH IE+ P
Sbjct: 118 RFAVCSALAASALPALIMARGHRIEKIAEVP 148
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
KI E+PLV++D ++ + KT AV L+ + A+ D+ K S+++RAGKGKMRNRR + RK
Sbjct: 143 KIAEVPLVISDAIESVTKTSAAVKLLKAVNAYEDVEKCIDSKKIRAGKGKMRNRRTVMRK 202
Query: 689 GP 694
GP
Sbjct: 203 GP 204
Score = 70.9 bits (166), Expect = 9e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 258
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGH+
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQ 58
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 404
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +3
Query: 243 GGWSQTSAESWGT--GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 398
GG + WG G + R P GGG R G +G M GG P + W
Sbjct: 54 GGMGRGPGGGWGRMQGGGMGRGP---GGGLGRGPGGGWGRMQEGGMGRGPGQGW 104
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 404
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 258 GGWGQGPGGGWGRGQGRG-MGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWF 256
HH CY H Y Y+ H H + R H YP RH++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQH-------VRYPMIRHWFVTSLL 241
HH RH R + +HHH H E+ R+H + +IRH F+ ++
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRHRYFTDINITIQIIRHHFIIIII 373
>SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = -3
Query: 384 GRTYVHHDTCYRR-HPDRTYEYHHHGHAEFGRQHVRYPMIRHWFVTSLLA-----HAVGL 223
G Y HH+ C+ Y H H Q +++ +R W+ L H +GL
Sbjct: 75 GVHYGHHEGCWNPLMKPYLYGTREHFHIIDLNQTIKHFRVRLWYFVYLYGNREHFHIIGL 134
Query: 222 PRVLGHRNVNIIDQVRTYGRLEH 154
+ + H V + V YG EH
Sbjct: 135 NQTIKHFRVRLWYFVYLYGNREH 157
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 262
Y +HP T+ YH H R H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 354 YRRHPDRTYEYHHHGHAEFGRQHVRYPMIRH 262
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVRYPMIRHWFVTSLL 241
HH + RH R + YHHH + H +P FVT+++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHYP----HHHHHPCTIIIFVTTII 608
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +1
Query: 430 SGERPWRQPLLLPASQHSFRLEDTLLKDSRTSPGCSRQSPGDQQD 564
SG P PLLLP S H LE S TSP +P D D
Sbjct: 661 SGMSPPLSPLLLPPSPHPITLEGADSSSSITSP--ISPAPSDDSD 703
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 378 TYVHHDTCYRRHPDRTYEYHHHGHA 304
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 333 TYEYHHHGHAEFGRQHVRYPMI-RHWFVTSLLAHAVGLP-RVLGHRNVN 193
+Y++HHHG E Q V I R W L +H P RV+G ++
Sbjct: 21 SYQWHHHGTGETDDQPVTTTRITRTWVNRRLNSHRTIKPSRVIGRAQIH 69
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -3
Query: 381 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVRY 277
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +3
Query: 210 QELEAALLREQGGWSQTSAESWGTGRA----VARIPR-VRGGGTHRS 335
+ E+AL E+ W+Q AES T RA +AR+ R GT RS
Sbjct: 3432 EHAESALAAERAQWAQEKAESQNTIRAANEEIARLKEDARKAGTERS 3478
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 258 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 374
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 415 ASTSDSGERPWRQ-PLLLPASQHSFRLEDTLLKDSRTSPGCSRQSPGDQQDQTGCHLPEA 591
++ D+ P RQ PLLL +H+ R +D R S PG Q G P
Sbjct: 534 SNNQDAAITPNRQSPLLLLTPKHNGRQKDLENSFERPEFRRSHSQPGQFWQQAGAQFPSH 593
Query: 592 PQGMV*Y 612
P GM Y
Sbjct: 594 P-GMFPY 599
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHH 313
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 149 GRGLAAPCTVSLFSEYTDTKGRATDRLI 66
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 375 YVHHDTCYRRHPDRTYEYHHHGH 307
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 381 RTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQHVRY 277
R Y H CYRR R + YHHH + +RY
Sbjct: 216 RCYYHCRRRCYRRR--RRHFYHHHPRRYHNHRRLRY 249
>SB_12491| Best HMM Match : rve (HMM E-Value=1.6e-18)
Length = 1106
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 380 RPHEALAALASSRQPPTAESGLGGSRCCYRRPSTR 484
R H AL A S+ P T SG GG R RR + R
Sbjct: 265 RDHTALKAGLSALAPVTDPSGHGGERLAERRHNGR 299
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 369 HHDTCYRRHPDRTYEYHHHGH 307
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,070,991
Number of Sequences: 59808
Number of extensions: 477869
Number of successful extensions: 1514
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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