Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021807
(704 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 125 2e-28
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 124 3e-28
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 124 3e-28
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 124 3e-28
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 123 5e-28
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 33 0.75
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 33 1.3
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 31 3.0
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 31 3.0
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 4.0
BC131489-1|AAI31490.1| 604|Homo sapiens USP35 protein protein. 31 5.3
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 125 bits (301), Expect = 2e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE FP P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEFPELP 151
Score = 93.9 bits (223), Expect = 5e-19
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
+ PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN RRIQR+
Sbjct: 146 EFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRR 204
Query: 689 GP 694
GP
Sbjct: 205 GP 206
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 134
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 135 RYAICSALAASALPALVMSKGHRIEEVPELP 165
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 160 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 219
Query: 689 GP 694
GP
Sbjct: 220 GP 221
Score = 81.0 bits (191), Expect = 4e-15
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +1
Query: 70 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 249
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 250 GHK 258
GH+
Sbjct: 73 GHQ 75
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 124 bits (299), Expect = 3e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
++GH IE P P
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 123 bits (297), Expect = 5e-28
Identities = 57/91 (62%), Positives = 58/91 (63%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXXXXXXXXQARGHIIERFPNFP 527
+GH IE P P
Sbjct: 121 RYAICSALAASALPALVMPKGHRIEEVPELP 151
Score = 101 bits (242), Expect = 3e-21
Identities = 45/62 (72%), Positives = 55/62 (88%)
Frame = +2
Query: 509 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 688
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 689 GP 694
GP
Sbjct: 206 GP 207
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.5 bits (73), Expect = 0.75
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +2
Query: 284 TCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALASSRQPPTAESGLG 448
T CR +AC W W++ V +GC W + H R+P E L
Sbjct: 80 TGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSLH 139
Query: 449 GSRCCYRRPSTRS 487
G+ C P+ RS
Sbjct: 140 GAPSCLSTPAPRS 152
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 407
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 526 PGCSRQSPGDQQDQTGCHLPEAPQGMV 606
PGC +++ GD DQ+ C PEA V
Sbjct: 273 PGCPKEAAGDASDQSTCTSPEASPSSV 299
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 526 PGCSRQSPGDQQDQTGCHLPEAPQGMV 606
PGC +++ GD DQ+ C PEA V
Sbjct: 80 PGCPKEAAGDASDQSTCTSPEASPSSV 106
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 69 ESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTS 176
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
>BC131489-1|AAI31490.1| 604|Homo sapiens USP35 protein protein.
Length = 604
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 193 VHVSMSKNSRQPYCVSKEAGHKPVPNHGVPDVLSPE 300
VH +S S YC ++E +P P+ G D PE
Sbjct: 438 VHSGVSSESGHYYCYAREGAARPAPSLGTADRPEPE 473
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,537,032
Number of Sequences: 237096
Number of extensions: 2335497
Number of successful extensions: 6651
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6541
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -