Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021806
(702 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7C99 Cluster: PREDICTED: similar to lethal (2)... 93 8e-18
UniRef50_Q9BQ67 Cluster: Glutamate-rich WD repeat-containing pro... 89 7e-17
UniRef50_Q4PGG1 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q6DBV2 Cluster: Zgc:92443; n=3; Clupeocephala|Rep: Zgc:... 73 7e-12
UniRef50_A1DN90 Cluster: Ribosome biogenesis protein (Rrb1), put... 69 8e-11
UniRef50_A6QYK2 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q6CBR7 Cluster: Yarrowia lipolytica chromosome C of str... 66 8e-10
UniRef50_A4QPR3 Cluster: Putative uncharacterized protein; n=3; ... 64 2e-09
UniRef50_Q54ED4 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5C3H2 Cluster: SJCHGC06562 protein; n=1; Schistosoma j... 63 7e-09
UniRef50_Q9N393 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q5CQT9 Cluster: WD repeat protein; n=2; Cryptosporidium... 60 5e-08
UniRef50_Q8GTM1 Cluster: WD40; n=2; Viridiplantae|Rep: WD40 - To... 59 9e-08
UniRef50_A2DSI5 Cluster: Ribosome assembly protein RRB1, putativ... 58 2e-07
UniRef50_Q9P783 Cluster: WD repeat protein Rrb1; n=1; Schizosacc... 58 2e-07
UniRef50_Q04225 Cluster: Ribosome assembly protein RRB1; n=11; S... 55 1e-06
UniRef50_A7AUN6 Cluster: WD domain, G-beta repeat containing pro... 54 3e-06
UniRef50_UPI0000E486DE Cluster: PREDICTED: similar to Glutamate-... 53 6e-06
UniRef50_Q5KL14 Cluster: Ribosome biogenesis-related protein, pu... 52 1e-05
UniRef50_Q4Q3Z6 Cluster: Putative uncharacterized protein; n=5; ... 52 2e-05
UniRef50_UPI0000499E2C Cluster: Glutamate-rich WD-repeat protein... 51 3e-05
UniRef50_A4RYE7 Cluster: Predicted protein; n=1; Ostreococcus lu... 49 1e-04
UniRef50_A0C2S8 Cluster: Chromosome undetermined scaffold_145, w... 44 0.003
UniRef50_UPI00006CAFBB Cluster: hypothetical protein TTHERM_0046... 44 0.005
UniRef50_UPI0000DB7088 Cluster: PREDICTED: similar to WD repeat ... 39 0.10
UniRef50_Q8IAZ7 Cluster: Putative uncharacterized protein PF08_0... 38 0.24
UniRef50_Q7QZN8 Cluster: GLP_680_35708_37303; n=1; Giardia lambl... 35 1.7
UniRef50_UPI0000E49596 Cluster: PREDICTED: similar to KIAA1824 p... 35 2.2
UniRef50_Q4YYT2 Cluster: Putative uncharacterized protein; n=4; ... 35 2.2
UniRef50_UPI00015B5E45 Cluster: PREDICTED: similar to wd-repeat ... 34 2.9
UniRef50_P13712 Cluster: Chromatin assembly factor 1 subunit p50... 34 2.9
>UniRef50_UPI0000DB7C99 Cluster: PREDICTED: similar to lethal (2)
09851 CG12792-PA; n=1; Apis mellifera|Rep: PREDICTED:
similar to lethal (2) 09851 CG12792-PA - Apis mellifera
Length = 431
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLHP 434
Y MLH AQ+GAPCLSFDI+ DNL N+R +P+ YLVAGTQA+ H+NNLLV+KM NL+
Sbjct: 55 YRMLHHAQSGAPCLSFDIILDNLDNNRENYPLCMYLVAGTQAAKTHINNLLVMKMENLYD 114
Query: 435 I 437
I
Sbjct: 115 I 115
>UniRef50_Q9BQ67 Cluster: Glutamate-rich WD repeat-containing
protein 1; n=33; Eumetazoa|Rep: Glutamate-rich WD
repeat-containing protein 1 - Homo sapiens (Human)
Length = 446
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLHP 434
YV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL AGTQA SA N L++++M NLH
Sbjct: 54 YVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLCAGTQAESAQSNRLMMLRMHNLHG 113
Query: 435 ISKP 446
P
Sbjct: 114 TKPP 117
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
+ + + H G +NR+R + +A WSE G+V+++ + LQ V +P L +
Sbjct: 141 LELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF 196
>UniRef50_Q4PGG1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 538
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
Y MLH+ PCLSFD + D+LGNDR +P T+Y+VAGTQA +A N +LV+K S+LH
Sbjct: 125 YEMLHRLNVTWPCLSFDHLKDHLGNDRQSYPHTSYMVAGTQADTASRNEILVMKASSLH 183
>UniRef50_Q6DBV2 Cluster: Zgc:92443; n=3; Clupeocephala|Rep:
Zgc:92443 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 433
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLHP 434
Y M H+ QTGAPCLSFD+V D G+ R +FP++ L AGTQA +A N L+V++M NL
Sbjct: 45 YRMYHECQTGAPCLSFDVVLDGEGDRREQFPLSMVLCAGTQADTALSNRLIVMRMHNLQG 104
Query: 435 ISK 443
K
Sbjct: 105 TEK 107
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAV 649
+ + + H G +NR+R T LAA WSE G+V+I+++ QL+AV
Sbjct: 134 LELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRLQLEAV 180
>UniRef50_A1DN90 Cluster: Ribosome biogenesis protein (Rrb1),
putative; n=11; Pezizomycotina|Rep: Ribosome biogenesis
protein (Rrb1), putative - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 496
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASS--AHLNNLLVIKMSNL 428
Y MLH T PCLSFDIV D+LG++R +P T Y V+GTQA+ A N LLVIKMS L
Sbjct: 96 YDMLHTLSTPWPCLSFDIVRDSLGDNRKTYPATVYAVSGTQAAGGRAKENELLVIKMSGL 155
Query: 429 HPISK 443
+ K
Sbjct: 156 SKMEK 160
>UniRef50_A6QYK2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 484
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHL--NNLLVIKMSNL 428
Y MLH T PCLSFDIV D LG+ R +P T Y VAGTQA + L N L+V+K+S L
Sbjct: 97 YEMLHTLSTPWPCLSFDIVKDGLGDKRKTYPATVYAVAGTQADRSRLKDNELMVLKLSGL 156
Query: 429 HPISK 443
+ +
Sbjct: 157 SKMER 161
>UniRef50_Q6CBR7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 507
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y M+H + PCLSFDI+ D+LG+DR+ +P T YL GTQA N +LV+K+S L
Sbjct: 123 YEMIHSCRLKWPCLSFDILPDSLGSDRSTYPHTTYLACGTQAQKPKDNEILVLKISQL 180
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 497 AETTMTFSFIKHQGCVNRIRATNFKNSV---LAASWSELGRVDIWNITPQLQAVGDPG 661
++ M I VNR+R + F N L AS E IW+++PQ+++ PG
Sbjct: 199 SDPVMISKHIPTNSTVNRVRTSPFGNKTGEYLTASMMESSECHIWDLSPQIKSFDVPG 256
>UniRef50_A4QPR3 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 493
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQA--SSAHLNNLLVIKMSNL 428
Y MLH T PCLSFD++ D LG++R +P T Y VAGTQA S ++ N ++V+K S L
Sbjct: 119 YDMLHSLSTPWPCLSFDVIRDGLGDNRKVYPATMYTVAGTQAETSRSNENQIMVMKFSGL 178
Query: 429 HPISK 443
+ K
Sbjct: 179 SKMDK 183
>UniRef50_Q54ED4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 482
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = +3
Query: 246 SFCYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSN 425
S Y M+H PCLSF + D LG RN++P T YLVAGTQA A N ++++K
Sbjct: 89 STAYDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYLVAGTQADEAKNNKVIIMKAKQ 148
Query: 426 LH 431
LH
Sbjct: 149 LH 150
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGV 664
+ +FI H G VNRIR+ + + S + A+WS+ V IWNI L+A+ + V
Sbjct: 185 LQLAFINHNGAVNRIRSMD-QQSNIVATWSDNRSVYIWNIANHLKALDNETV 235
>UniRef50_Q5C3H2 Cluster: SJCHGC06562 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06562 protein - Schistosoma
japonicum (Blood fluke)
Length = 271
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = +2
Query: 497 AETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
AE + + I HQG VNR+RA FK LAASWSE G V IW +T L AV D V+ Y
Sbjct: 156 AEPDVEAATILHQGAVNRVRARQFKGRYLAASWSENGMVFIWELTRPLTAVNDSAVMAEY 215
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDR----NEFPMTAYLVAGTQASSAHLNNLLVIKMS 422
Y M + + + LSFDI+TDNLG DR N +A ++AGT+AS + N L+V+++
Sbjct: 66 YRMFFELEVESSSLSFDILTDNLGFDRCIEVNGEAHSACIIAGTEASKGYQNKLVVMRLC 125
Query: 423 NLHPISK 443
N+ P +
Sbjct: 126 NMLPFKR 132
>UniRef50_Q9N393 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 453
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +3
Query: 204 TRPAFKGR*TIGL*SFCYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQAS 383
+RP KG + Y + H + PCLSFD+V D LG +R +FP Y+V+GTQA
Sbjct: 48 SRPLKKGE-ELDFDPSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQAD 106
Query: 384 SAHLNNLLVIKMSNLHPISK 443
N ++V+ + NL + K
Sbjct: 107 KPRDNEIIVMGLKNLTTMRK 126
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 494 RAETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQL 640
+ E M I H G +NRIR+ +S + A WS+ GRV +WNIT L
Sbjct: 152 KREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDAL 200
>UniRef50_Q5CQT9 Cluster: WD repeat protein; n=2;
Cryptosporidium|Rep: WD repeat protein - Cryptosporidium
parvum Iowa II
Length = 500
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
Y M H+ CL+ DI+ D LG++R +FP T Y+VAGTQA+ N++L++K S +H
Sbjct: 97 YKMYHKCLVEWSCLTLDILPDKLGDNRTQFPHTCYVVAGTQANMEDNNHILLMKWSRMH 155
Score = 37.1 bits (82), Expect = 0.42
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 524 IKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQL 640
I H+G +NRIR + L ++WSELG+V +W+IT +
Sbjct: 194 IPHKGTINRIRVCPQLPN-LVSTWSELGKVCMWDITESI 231
>UniRef50_Q8GTM1 Cluster: WD40; n=2; Viridiplantae|Rep: WD40 -
Tortula ruralis (Star moss) (Twisted moss)
Length = 489
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y LH + G PCLSFDI+ D+LG R +FP + VAGTQA A N + V++M+N+
Sbjct: 67 YHCLHSFKLGWPCLSFDIMRDDLGVLRRDFPHSLQCVAGTQADQAGNNAIAVVRMTNI 124
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 524 IKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPG 661
+ HQGCVNR+RA + S + A+W++ G V +W++ L+++ G
Sbjct: 180 VAHQGCVNRVRAMT-QQSNIVATWADTGYVQVWDMAAHLRSMATSG 224
>UniRef50_A2DSI5 Cluster: Ribosome assembly protein RRB1, putative;
n=1; Trichomonas vaginalis G3|Rep: Ribosome assembly
protein RRB1, putative - Trichomonas vaginalis G3
Length = 400
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +3
Query: 288 PCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
PCLSFD++ D LG R FP TAY V+ TQA S N LLV K+S L
Sbjct: 24 PCLSFDVIQDTLGASRRTFPHTAYFVSATQAESEDENQLLVTKISEL 70
>UniRef50_Q9P783 Cluster: WD repeat protein Rrb1; n=1;
Schizosaccharomyces pombe|Rep: WD repeat protein Rrb1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 480
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
Y MLH Q P LSFDI+ D+LG +R +P YLV G+QA ++ N L V+K+S L+
Sbjct: 94 YEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQLY 152
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +2
Query: 524 IKHQGCVNRIRAT----NFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVL 667
I +G NR+R+ N L AS+ E G+V IW+I P L+++ PGV+
Sbjct: 179 ISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVM 230
>UniRef50_Q04225 Cluster: Ribosome assembly protein RRB1; n=11;
Saccharomycetales|Rep: Ribosome assembly protein RRB1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 511
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y MLH PCL+ D++ D LG++R +P + L TQ+S N L+V+ +SNL
Sbjct: 118 YEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSNL 175
>UniRef50_A7AUN6 Cluster: WD domain, G-beta repeat containing
protein; n=3; Piroplasmida|Rep: WD domain, G-beta repeat
containing protein - Babesia bovis
Length = 430
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +3
Query: 252 CYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQ--ASSAHLNNLLVIKMSN 425
CY MLH PCLSFD+ D LG R +FP T Y++AGTQ +S + ++K SN
Sbjct: 56 CYDMLHTITVDWPCLSFDVFADELGACRVQFPHTCYVIAGTQPDGNSKKEAAIHLMKWSN 115
Query: 426 L 428
L
Sbjct: 116 L 116
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 497 AETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPG 661
+E + S I+H G VNRIR N L + ++ G+V IW++ Q + + D G
Sbjct: 133 SEAVLKCSSIRHPGIVNRIRCCPQSNR-LVCTMADTGKVHIWDVDDQKRRLDDKG 186
>UniRef50_UPI0000E486DE Cluster: PREDICTED: similar to
Glutamate-rich WD repeat containing 1; n=2;
Deuterostomia|Rep: PREDICTED: similar to Glutamate-rich
WD repeat containing 1 - Strongylocentrotus purpuratus
Length = 581
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 518 SFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
+ I H G VNRIR T + +AASWS+ G V IW+++ LQA+ P + +Y
Sbjct: 282 AMIDHLGSVNRIRRTTVGDRQVAASWSDTGNVHIWDLSDPLQALESPAAMAKY 334
Score = 52.8 bits (121), Expect = 8e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVA 368
Y M H AQTG+PCLSFDI+ D LG+ R +P + Y+VA
Sbjct: 75 YHMYHHAQTGSPCLSFDILKDGLGDSRVAYPHSVYIVA 112
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 500 ETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
E T++ + +G V R T + +AASWS+ G V IW+++ LQA+ P + +Y
Sbjct: 123 EQASTYNIVFLRGKVKR---TTVGDRQVAASWSDTGNVHIWDLSDPLQALESPAAMAKY 178
>UniRef50_Q5KL14 Cluster: Ribosome biogenesis-related protein,
putative; n=2; Filobasidiella neoformans|Rep: Ribosome
biogenesis-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 489
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQA 380
Y+ LH PCLSFD++ D+LG DR +P T+++V GTQA
Sbjct: 97 YLALHSLSYAWPCLSFDVLRDSLGTDRATYPHTSWIVTGTQA 138
>UniRef50_Q4Q3Z6 Cluster: Putative uncharacterized protein; n=5;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 584
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y Q +T PCLSFD+V DN N ++P++ LV GTQA N LLV+ ++N+
Sbjct: 155 YDAFFQLRTEYPCLSFDVVRDNKDN-HTKYPLSTVLVCGTQADQQARNELLVLYVTNM 211
>UniRef50_UPI0000499E2C Cluster: Glutamate-rich WD-repeat protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: Glutamate-rich
WD-repeat protein - Entamoeba histolytica HM-1:IMSS
Length = 517
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y MLH+ CLSFDI+ D LG R P T Y AGT A+S N + +K +
Sbjct: 136 YKMLHELSLEWSCLSFDIIPDTLGALRTTAPYTLYFAAGTNAASGKKNKVYTVKAEGM 193
>UniRef50_A4RYE7 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 441
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNL 428
Y LH PCLS D++ D+LG R FP +V GTQA A N L VI++S +
Sbjct: 40 YDALHAFSHEWPCLSLDVMRDDLGEGREVFPHEMTIVTGTQAMEATKNVLSVIRVSRI 97
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +2
Query: 506 TMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAV 649
T+T + + H GCVNR+RA + S ASWS+ G V IW+++ QL+ V
Sbjct: 127 TLTVASVVHHGCVNRLRAMPQRPST-CASWSDSGHVMIWDLSAQLKKV 173
>UniRef50_A0C2S8 Cluster: Chromosome undetermined scaffold_145,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_145,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 553
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVT---------DNLGNDRNEFPMTAYLVAGTQASSAHLNNLL 407
Y MLH+ T PCLS D V + + N++P T Y+ AGTQA+ N +
Sbjct: 135 YNMLHRVTTEWPCLSCDFVLTEEEQLQYKNKEYHKMNKYPYTVYMAAGTQAAQPTKNQIY 194
Query: 408 VIKMSNLH 431
++K+S +H
Sbjct: 195 LLKLSKMH 202
>UniRef50_UPI00006CAFBB Cluster: hypothetical protein
TTHERM_00467910; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00467910 - Tetrahymena
thermophila SB210
Length = 586
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVT---DNLGN----DRNEFPMTAYLVAGTQASSAHLNNLLVI 413
Y MLH+A T PCLS D VT N+ N + ++P Y+VAGTQ S N + ++
Sbjct: 160 YEMLHRANTEWPCLSCDFVTGEPHNINNPGFQEMKKYPYDVYVVAGTQ--SKQQNFIYLM 217
Query: 414 KMSNLH 431
+ S LH
Sbjct: 218 RWSKLH 223
>UniRef50_UPI0000DB7088 Cluster: PREDICTED: similar to WD repeat
protein 22; n=1; Apis mellifera|Rep: PREDICTED: similar
to WD repeat protein 22 - Apis mellifera
Length = 743
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 497 AETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
+E + H GCVN I +N L S + RV +W + +Q VG P V++
Sbjct: 36 SENLFRKDLLSHYGCVNAIEFSN--QGDLLVSGGDDRRVLLWKVEQAIQDVGKPAVMKAQ 93
Query: 677 HLGTXF 694
H+ F
Sbjct: 94 HISNIF 99
>UniRef50_Q8IAZ7 Cluster: Putative uncharacterized protein
PF08_0065; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF08_0065 - Plasmodium
falciparum (isolate 3D7)
Length = 491
Score = 37.9 bits (84), Expect = 0.24
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 17/78 (21%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGND---------RNE--------FPMTAYLVAGTQAS 383
Y ML T PCLSFD + ++ +D R E +P+ VAGTQA+
Sbjct: 12 YDMLFSPLTPWPCLSFDYILEHPKHDALSEEEKKRRKENIDSGILNYPLEVCCVAGTQAN 71
Query: 384 SAHLNNLLVIKMSNLHPI 437
LN + VIK SNL+ +
Sbjct: 72 KRELNQIYVIKWSNLNKL 89
>UniRef50_Q7QZN8 Cluster: GLP_680_35708_37303; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_35708_37303 - Giardia lamblia
ATCC 50803
Length = 531
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQ 377
Y LH+ P LS D + DN G +R+EFP L+ G Q
Sbjct: 78 YDYLHRFTVVWPVLSLDPIVDNFGLNRSEFPHQLLLLGGCQ 118
>UniRef50_UPI0000E49596 Cluster: PREDICTED: similar to KIAA1824
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to KIAA1824 protein -
Strongylocentrotus purpuratus
Length = 818
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 494 RAETTMTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLER 673
R E + H GCVN I +N LA+ + R+ +WN+ L + +P +++
Sbjct: 11 RKEPFYRLDLLGHYGCVNAIEFSNRGGDYLASGGDD-RRILLWNVDEALHSKYEPRIMKG 69
Query: 674 YHLGTXF 694
H F
Sbjct: 70 EHHSNIF 76
>UniRef50_Q4YYT2 Cluster: Putative uncharacterized protein; n=4;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 443
Score = 34.7 bits (76), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Frame = +3
Query: 255 YVMLHQAQTGAPCLSFDIVTDN------LGNDRN---------EFPMTAYLVAGTQASSA 389
Y +L T PCLSFD + +N + N +N +P+ V+GTQA+
Sbjct: 12 YDLLFCPTTPWPCLSFDFIYNNQNKEDCISNQKNGKEFKGNELTYPIDITCVSGTQATEK 71
Query: 390 HLNNLLVIKMSNLHPI 437
N++ VIK NL+ +
Sbjct: 72 ESNSIYVIKWGNLNKL 87
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 524 IKH-QGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGD 655
IKH GC+NRI+++ NS++ A W E +V I+ I +++ + +
Sbjct: 134 IKHTHGCINRIKSSKKINSLVGA-WCEDKKVYIYEIRDEIEGLNE 177
>UniRef50_UPI00015B5E45 Cluster: PREDICTED: similar to wd-repeat
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to wd-repeat protein - Nasonia vitripennis
Length = 1865
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 530 HQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERYHLGTXF 694
H GCVN I + K L S + RV +W++ +Q G P +++ +HL F
Sbjct: 101 HYGCVNAIEFS--KEGDLLISGGDDKRVLLWDVERSIQEHGKPIMMKAHHLSNIF 153
>UniRef50_P13712 Cluster: Chromatin assembly factor 1 subunit p50;
n=4; Saccharomycetales|Rep: Chromatin assembly factor 1
subunit p50 - Saccharomyces cerevisiae (Baker's yeast)
Length = 422
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 527 KHQGCVNRIRATNFKNSVLAASWSELGRVDIWNI 628
KH G VN R N+KNS++ AS GR+++W+I
Sbjct: 294 KHDGGVNSCRF-NYKNSLILASADSNGRLNLWDI 326
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,659,547
Number of Sequences: 1657284
Number of extensions: 10817114
Number of successful extensions: 21414
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 20853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21394
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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