Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021806
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p pro...   104   1e-22
AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p pro...   104   1e-22
AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA...   104   1e-22

>AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p
           protein.
          Length = 456

 Score =  104 bits (249), Expect = 1e-22
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
           YVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAGTQAS AH+NNL+V+KMSNLH
Sbjct: 63  YVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLH 121



 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +2

Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
           MT + +KHQGCVNR+RA    NSV AASWSELGRV+IW++T  LQAV +  + ++Y
Sbjct: 152 MTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQY 207



 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 193 KTYLPDQPLKEDEQLVCDHSA 255
           + YLP   L +DE+LVCD SA
Sbjct: 42  EVYLPGTKLADDEELVCDESA 62


>AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p
           protein.
          Length = 456

 Score =  104 bits (249), Expect = 1e-22
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
           YVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAGTQAS AH+NNL+V+KMSNLH
Sbjct: 63  YVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLH 121



 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +2

Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
           MT + +KHQGCVNR+RA    NSV AASWSELGRV+IW++T  LQAV +  + ++Y
Sbjct: 152 MTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQY 207



 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 193 KTYLPDQPLKEDEQLVCDHSA 255
           + YLP   L +DE+LVCD SA
Sbjct: 42  EVYLPGTKLADDEELVCDESA 62


>AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA
           protein.
          Length = 456

 Score =  104 bits (249), Expect = 1e-22
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 255 YVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAGTQASSAHLNNLLVIKMSNLH 431
           YVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAGTQAS AH+NNL+V+KMSNLH
Sbjct: 63  YVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLH 121



 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +2

Query: 509 MTFSFIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITPQLQAVGDPGVLERY 676
           MT + +KHQGCVNR+RA    NSV AASWSELGRV+IW++T  LQAV +  + ++Y
Sbjct: 152 MTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQY 207



 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 193 KTYLPDQPLKEDEQLVCDHSA 255
           + YLP   L +DE+LVCD SA
Sbjct: 42  EVYLPGTKLADDEELVCDESA 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,020,618
Number of Sequences: 53049
Number of extensions: 517313
Number of successful extensions: 1159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)