Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021804
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 460 IFYYCFIVISRRPKSSALYIV*YFISYILVLIIIH-MYF 573
           +F +C+   + +     +Y   +FI Y+ +L+  H  YF
Sbjct: 269 VFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPTYF 307


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/35 (25%), Positives = 22/35 (62%)
 Frame = +2

Query: 428  QRYICLRNSILYFIIVSL*FLVVQRAVHYTSYNIS 532
            Q + CL+  ++Y++ V   +L++   V Y+ +N++
Sbjct: 997  QEFNCLKYGVIYYVTVPSMYLLL---VIYSVFNMN 1028


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/35 (25%), Positives = 22/35 (62%)
 Frame = +2

Query: 428  QRYICLRNSILYFIIVSL*FLVVQRAVHYTSYNIS 532
            Q + CL+  ++Y++ V   +L++   V Y+ +N++
Sbjct: 997  QEFNCLKYGVIYYVTVPSMYLLL---VIYSVFNMN 1028


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 435 IFVYEIPFYILLLFHCDFSSSKEQ 506
           +FVY +   IL++  CD  +S  +
Sbjct: 217 VFVYTLVSVILIIMGCDVVASNSR 240


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +2

Query: 161 LFCEDRYRCIDVDNVIINYLKKKTIPVI*FNILKVNFIFRFTDIIQIVTYLE 316
           +FC        +D  I+ Y+ K     +  N+  +N+ F+ ++    V+ L+
Sbjct: 91  IFCSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERNDYVSLLQ 142


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 693 QIYNYYIIDLTQKVHL 646
           +IY +Y + +T  VHL
Sbjct: 55  RIYYFYCVSITFNVHL 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,378
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)