Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021803
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 41 8e-04
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 41 8e-04
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 2.6
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 4.5
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 4.5
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 28 4.5
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 4.5
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 4.5
Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical ... 28 5.9
AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = +3
Query: 6 LRKDITETLKLRQHDANEQVRYEVVMAIIATAQRDFQAVAESEDLLHFVKERTLDKKFKI 185
LR I +L D N+ +R +VV + A+ + + S+ +L ER DKK K+
Sbjct: 390 LRGQIINSLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVI--SDKMLKACAERMKDKKPKV 447
Query: 186 RKEAMSGLAMIYKKFLTEESVPALPRKRSSGSK 284
R +A+ L +Y +T P + S K
Sbjct: 448 RIQAIKRLMDLYNHVMTSSPQPFFSKDGSCAPK 480
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +2
Query: 260 EKAVQWIKDKILHGYYMT----ALED-RLLVERLLNTSLVPYTLQSAVRMKKLYYLMSNV 424
+++V++I + + Y +T A D R ++ER LVPY ++ +R++ + L N+
Sbjct: 494 KESVRFISTAVFNVYRLTQRLPAYHDARAIIERYFQLYLVPYKVEPKLRVRLMADLFRNL 553
Query: 425 DDNATKAFIELQKHQLAVRRTV 490
DD F ++ +RR +
Sbjct: 554 DDIGCMLFGDIINRSSQLRRAM 575
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = +3
Query: 6 LRKDITETLKLRQHDANEQVRYEVVMAIIATAQRDFQAVAESEDLLHFVKERTLDKKFKI 185
LR I +L D N+ +R +VV + A+ + + S+ +L ER DKK K+
Sbjct: 390 LRGQIINSLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVI--SDKMLKACAERMKDKKPKV 447
Query: 186 RKEAMSGLAMIYKKFLTEESVPALPRKRSSGSK 284
R +A+ L +Y +T P + S K
Sbjct: 448 RIQAIKRLMDLYNHVMTSSPQPFFSKDGSCAPK 480
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +2
Query: 260 EKAVQWIKDKILHGYYMT----ALED-RLLVERLLNTSLVPYTLQSAVRMKKLYYLMSNV 424
+++V++I + + Y +T A D R ++ER LVPY ++ +R++ + L N+
Sbjct: 494 KESVRFISTAVFNVYRLTQRLPAYHDARAIIERYFQLYLVPYKVEPKLRVRLMADLFRNL 553
Query: 425 DDNATKAFIELQKHQLAVRRTV 490
DD F ++ +RR +
Sbjct: 554 DDIGCMLFGDIINRSSQLRRAM 575
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 432 TPRKRSSSYKSTNSQSGARSRNGSS 506
T ++RSSSY ST+S S RSR+ SS
Sbjct: 248 TRKRRSSSYSSTSSSSDGRSRSRSS 272
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 12 KDITETLKLRQHDANEQVRYEVVMAIIATAQRDFQAVAESEDLLHFVKERTLDKKFKIRK 191
+D+ + + R D++ QVR V I D + V + + ER LD +RK
Sbjct: 1347 EDVQQAVHTRMVDSHAQVRESAVELIGRFVLYDEEYVRKYYSQ---IAERILDTGVAVRK 1403
Query: 192 EAMSGLAMIYKKFLTEESVP 251
+ + I +KF T E +P
Sbjct: 1404 RVIRIMREICEKFPTFEMIP 1423
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 205 PDMASFLILNFLSNVLSLTKCRRSSDSAT-AWK 110
P+ ++FL+L + +++ CR SS +A+ AWK
Sbjct: 299 PNESTFLLLGTMKGQVNVVDCRESSGNASAAWK 331
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 530 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 572
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 556 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 598
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 530 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 572
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 556 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 598
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 397 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 439
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 214 MARPDMASFLILNFLSNVLSLTKCRRSSDSATAWKSLWAVAMIAMTTSYRTCSLASCCLS 35
MA PD A L+ F+ + +L +CR+ + S ++ A+ A ++ T ++A+ S
Sbjct: 1 MATPDSACPLLYEFVISPFALEECRQGTSSEPGRMRPFSDAVTASASTTSTTAVATTVTS 60
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 530 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 572
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 365 PYTLQSAVRMKKLYYLMSNVDDNATKAFIELQKHQLAVRRTVAE 496
PY + ++ + + +DDN+ K F E+ QL+VR + E
Sbjct: 556 PYPMDQHLQQARRFPSQEPIDDNSYKVF-EITPSQLSVREKIGE 598
>Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical
protein C50F4.1 protein.
Length = 362
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 108 DFQAVAESEDLLHFVKERTLDKKFKIRKEAMSGLAMIYKKFLTEESVPAL 257
+ + VA LH V +T++K+F + + G + +KK + +E + L
Sbjct: 120 ELEQVASQIAKLHAVNSKTINKQFSLNVQENYGNIISFKKKIQKELIEVL 169
>AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical
protein F54D10.5 protein.
Length = 235
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 152 DEMQEVLRLGDRLEVSLGRRDDRHDDLIPDLF 57
D+++E+LR L V LGR +D IP+ F
Sbjct: 20 DDVEEILRNNPMLNVILGRTQLMANDQIPEAF 51
>AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical
protein K02F6.3 protein.
Length = 839
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 402 SFFIRTADCNVYGTSEVFRSLSTRSRSSNA 313
S + AD NVYG +VF+SL + NA
Sbjct: 437 SLIKKIADLNVYGDGKVFKSLLADIKKINA 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,556,421
Number of Sequences: 27780
Number of extensions: 322484
Number of successful extensions: 945
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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