Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021802X
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   0.79 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.79 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.7  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 288 CTGSGAKRTSTYEVVVHERTH 226
           C     + T +Y +++HERTH
Sbjct: 82  CKYCNRQFTKSYNLLIHERTH 102


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +1

Query: 109 LLISLVEFQSRNILRAAALAEIVLFPVVLIMALFCHCGLMSPFVYYYFVR 258
           LL+ +  F   ++L   A     +  + L+   + +C L+     YYF R
Sbjct: 254 LLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCR 303


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 382 PSTSCAAWRRPSSNNNSNLCTEKYQVILTNDTTSSA 489
           PSTS   W   + NN++N   +       N+T+S A
Sbjct: 369 PSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNTSSRA 404


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 486 CTLLHQCKFGWILT 527
           CTL+++CKF   +T
Sbjct: 738 CTLMNRCKFSEFMT 751


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 259 GGTLRAGTRTPATRSASSALSPTDSRSAP 345
           G T  A    PAT S+ S  S   + SAP
Sbjct: 26  GMTSPAAAPPPATTSSGSPASVASNASAP 54


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +1

Query: 331 SRSAPGCSLNSPQC*APPSTSCAAWRRPSSNNNSNLCTEKYQVIL 465
           S  AP   L S      P   C    RP+    + +CT K  + L
Sbjct: 532 SYMAPPAPLISQYDDIDPQQFCNGDNRPADCQQNCMCTHKVDIPL 576


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 337 CVSPSATTRSSRNVLRVYGFRREAY 263
           CV+ ++   S+RNV +   F  +AY
Sbjct: 732 CVNATSLVESNRNVPQKCIFNGQAY 756


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,292
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)