Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021802X
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 34 0.069
02_05_0529 + 29802027-29802281,29802468-29802641,29802755-298028... 31 0.48
11_06_0410 - 23223701-23223714,23223863-23225159,23225314-232262... 31 0.64
04_03_0228 + 13004688-13005044 31 0.64
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 31 0.64
09_02_0020 + 3042502-3042980,3043068-3043176,3043290-3043476,304... 31 0.85
09_04_0504 + 18180321-18181013 30 1.1
10_02_0165 - 6063944-6064552 29 3.4
05_03_0653 + 16617121-16617359,16618892-16618955,16619455-166194... 29 3.4
11_06_0643 - 25773250-25773843 28 4.5
11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458 28 6.0
09_01_0140 + 2083885-2083969,2084178-2084653 28 6.0
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 28 6.0
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 28 6.0
01_06_0610 - 30587269-30587717,30587996-30588212,30588363-305884... 28 6.0
08_02_1082 + 24225592-24226422 27 7.9
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 27 7.9
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 27 7.9
04_04_1525 - 34156813-34157058,34157245-34157435,34157885-341579... 27 7.9
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 27 7.9
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 301 SASSALSPTDSRSAPGCSLNSPQC*APPSTSCAAWRRPSSNNNSNLCTEKYQVILTNDT 477
++S + SPT S + SPQC PS SC A S N +Q +L D+
Sbjct: 138 ASSPSFSPTQSSTYRTVPCGSPQCAQVPSPSCPAGVGSSCGFNLTYAASTFQAVLGQDS 196
>02_05_0529 +
29802027-29802281,29802468-29802641,29802755-29802847,
29802921-29802989,29803231-29803437,29803754-29803879,
29803996-29804148
Length = 358
Score = 31.5 bits (68), Expect = 0.48
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 258 WRYASRRNPYTRNT-FRELR---VVADGLTQRPWVLAELASVLSSAIDIVCCMA 407
WRY R P NT F+EL V+ DGL + + S + SAI++V MA
Sbjct: 127 WRYMWRVGPRPANTRFKELNSEPVIPDGLPEWKETMDSWGSKMISAIEVVAEMA 180
>11_06_0410 -
23223701-23223714,23223863-23225159,23225314-23226225,
23226952-23227023,23227323-23227471,23227879-23227912
Length = 825
Score = 31.1 bits (67), Expect = 0.64
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 154 AAALAEIVLFPV---VLIMALFCHCGLMSPFVYYYFVRGGTLRAGTRTPATRSA--SSAL 318
AAALAE + V +I ALFCHCG+ ++ + R T P+ +S+ S+ +
Sbjct: 739 AAALAEDLKSGVEFVTVIWALFCHCGIEKSKLWQQ-QKSANFRNSTPGPSNQSSDVSTHV 797
Query: 319 SPTDSRSAPGCSLNSPQC*APPST 390
T S S P + A P++
Sbjct: 798 QDTVSSSPPAARSSEIHVEASPTS 821
>04_03_0228 + 13004688-13005044
Length = 118
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 280 TRTPATRSASSALSPTDSRSAPGCSLNSP 366
TR PAT SA+ + PT S SAP S P
Sbjct: 3 TRAPATGSATVTVDPTPSSSAPASSAPPP 31
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 240 HERTHQAAVAEQRHDEYDREQHDLGERRGPEDVPRLELDQGDEQTSHPQRIL 85
H +A ++R ++ R++ D GER ED R E D E+T P+ ++
Sbjct: 37 HRHPERAGEEQERAEDDKRDEGD-GERDAREDKERREGDSQGEETDEPRGVV 87
>09_02_0020 +
3042502-3042980,3043068-3043176,3043290-3043476,
3043690-3043784
Length = 289
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -1
Query: 303 GTCCGCTGSGAKRTSTYEVVVHERTHQAAVAEQRHDEYDREQHDLGERRG 154
G CGC A R + E++ Q+ E+R + R ++ ERRG
Sbjct: 92 GAQCGCGAGAAARDAGGELMRVGPPKQSDAGEERRGAWSRRSSEMWERRG 141
>09_04_0504 + 18180321-18181013
Length = 230
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 247 YFVRGGTLR-----AGTRTPATRSASSALSPTDSRSAPGCSLNSPQ 369
Y+ +GG+LR G+R +T S+S+A + S S+P SP+
Sbjct: 75 YWTKGGSLRNVPVGGGSRKSSTSSSSAAAAAASSSSSPSSPAKSPK 120
>10_02_0165 - 6063944-6064552
Length = 202
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 284 VHPQHVPRAPRCRRRTHAAPLGAR*TRLSAELRH 385
+HP H RCR R P G+R T LS EL H
Sbjct: 96 MHPYHEEDDSRCRLRLTGEPEGSRCTLLS-ELAH 128
>05_03_0653 + 16617121-16617359,16618892-16618955,16619455-16619485,
16619577-16619848,16620528-16620633,16620715-16620872,
16621527-16621714,16621786-16621855,16622814-16622984,
16624363-16624838,16625625-16625871,16626158-16626490,
16627329-16627412,16627751-16627843,16627966-16628025,
16628582-16628680,16628830-16628970,16629207-16629287,
16629895-16629966,16631160-16631231,16632083-16632176,
16632257-16632339,16632455-16632532,16632914-16632970,
16633055-16633132,16633236-16633357,16633463-16633623,
16634419-16634495,16634570-16634683,16634857-16634958,
16635368-16635436,16635437-16635577,16635936-16636109,
16636934-16637063,16637137-16637276,16637369-16637446,
16637813-16637911,16638408-16638803
Length = 1749
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 183 PGRTHHGVVLPLRLDESVRVLLLR-TWRYASRRNPYTR 293
P TH G++L L E +RVL + +RY S+ + TR
Sbjct: 913 PNFTHAGLLLAFGLHEHLRVLTMTDAYRYLSQEHDITR 950
>11_06_0643 - 25773250-25773843
Length = 197
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 286 TPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTSCAAWRRPSS-----NNNSNLCTEK 450
+P T S++ SP+ S+P C SP A PS + W SS N+ S C +
Sbjct: 106 SPPTSSSAPPSSPSPGASSPPCLPTSP---AIPSPRASVWWSSSSTDVFLNSVSARCCRR 162
Query: 451 Y 453
Y
Sbjct: 163 Y 163
>11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458
Length = 619
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 187 VVLIMALFCHCGLMSPFVYYYFVRGGTLRAGTRTPATRSASSALS 321
+ LI ALFCHCG+ ++ +G ++G TP + SS S
Sbjct: 575 ITLIWALFCHCGIEKSELWQE-KKGA--KSGNDTPGLVNQSSPAS 616
>09_01_0140 + 2083885-2083969,2084178-2084653
Length = 186
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 320 RRRTHAAPLGAR*TRLSAELRHRHRV 397
RRR H AP+GAR +A R HR+
Sbjct: 102 RRRQHPAPMGARRAVTNAGRRSSHRL 127
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -2
Query: 311 ELAERVAGVRVPARSVPPRTK**YTNGLIKPQWQNNAMMSTTGNSTISASAAARRMFRDW 132
++A RVA + AR+ P T T KP+ ++ + T + S+S+ +R FR
Sbjct: 705 DIANRVASEKRNARTRSPLT----TTLSSKPEAGQDSSVDTCTSEIRSSSSGKQRRFRSP 760
Query: 131 NSTREMSRRA 102
S RE+ ++
Sbjct: 761 LSVRELDEKS 770
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 292 ATRSASSALSPTDSRSAPGCSLNSPQC*A-PPSTSCAAWRRPS 417
A+ S SSA SP+ + GCS + A P+++ A W PS
Sbjct: 29 ASSSCSSAASPSSASGPRGCSAVRMETGAVEPASTGAIWSTPS 71
>01_06_0610 -
30587269-30587717,30587996-30588212,30588363-30588482,
30589092-30589202,30589300-30589374,30589940-30590031,
30590121-30590302,30590479-30590570,30591179-30591283,
30591374-30591451,30591553-30591705
Length = 557
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 385 STSCAAWRRPSSNNNSNLCTEKYQVILTNDTTSSAPYC 498
+ S +WR P LC+ + N+ T AP+C
Sbjct: 379 TVSIVSWRTPFKRMRRGLCSSWLAGLNPNEGTGCAPFC 416
>08_02_1082 + 24225592-24226422
Length = 276
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +1
Query: 247 YFVRGGTLR-----AGTRTPATRSASSALSPTDSRSAP 345
Y+ +GGTLR GTR ++ S+SS+ S + + +AP
Sbjct: 94 YWTKGGTLRNVPVGGGTRKKSSSSSSSSSSSSAAAAAP 131
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 279 SGAKRTSTYEVVVHERTH--QAAVAEQRHDEYDREQHDLGERRGPEDVPRLELD 124
+G+KR T + V + +A QRH++ D+E+ E G ED E+D
Sbjct: 240 AGSKRLHTSDCTVEQPVQGKRAFNFLQRHNQADQEEEQEEEYAGAEDGSSSEID 293
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 243 LLLRTWRYASRRNPYT--RNTFRELRVVADGLTQRPWVLA-ELASVLSSAIDIVCCMAPP 413
L L +YASR N + RE + QR L ELA+ +A D PP
Sbjct: 554 LQLTQLKYASRENVIKTLQEKIREAEQTSKTYQQRVRELENELANEKKAARDTARSTKPP 613
Query: 414 VEQQQQ*SVYGKISSHI 464
+ +Q G+I +HI
Sbjct: 614 LAPMRQRPPLGRIGNHI 630
>04_04_1525 -
34156813-34157058,34157245-34157435,34157885-34157956,
34158351-34158419,34158531-34158639,34158872-34158987,
34159117-34159210,34159289-34159460,34159545-34159669
Length = 397
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 YSLTILDTLGQNSLWVARLLISLVEF 132
+ L I++ LG NSLWV R L F
Sbjct: 163 HHLLIMEELGGNSLWVDRFLARFAAF 188
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 280 TRTPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTS 393
T TP+ S + + S GCS + C APPS S
Sbjct: 124 TPTPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPS 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,323,800
Number of Sequences: 37544
Number of extensions: 365664
Number of successful extensions: 1606
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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