Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021802X
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical... 49 2e-06
AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical ... 31 0.44
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 31 0.76
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.3
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.3
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81475-5|CAH04698.1| 130|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 28 4.1
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 28 5.4
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 28 5.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 27 7.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 7.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 7.1
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 27 7.1
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 27 7.1
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 27 7.1
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 7.1
U64603-4|AAO61442.1| 410|Caenorhabditis elegans Serotonin/octop... 27 9.4
U64603-3|AAM15552.1| 422|Caenorhabditis elegans Serotonin/octop... 27 9.4
U64603-2|AAB04582.3| 435|Caenorhabditis elegans Serotonin/octop... 27 9.4
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 27 9.4
U23450-5|AAK31466.3| 706|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine r... 27 9.4
>AL032626-27|CAA21541.1| 271|Caenorhabditis elegans Hypothetical
protein Y37D8A.17 protein.
Length = 271
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 16 VPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVL 195
+P+ ++A LHA ++ IL G S + +L Q++N L A +EI L P+++
Sbjct: 138 LPVTIYAALHACTFMTKILRETGHTSSIIPKLE-QFTAHQTQNALGIIACSEIFLVPLLV 196
Query: 196 IMALFCHCGLMSPFVYYYFVRGGTLR-AGTRTPATRSA 306
+ L+ PF YY F+ +LR A R P+TR A
Sbjct: 197 SLIFSGKGSLLLPFAYYRFL---SLRYASRRNPSTRQA 231
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 261 RYASRRNPYTRNTFRELRVVADGLTQRPWVLAELASVLSSAIDIVCCMAPPV 416
RYASRRNP TR F ++R + ++S++ AID + APPV
Sbjct: 219 RYASRRNPSTRQAFAQMRGSLQNVAMSSSCPRPISSLIYRAIDFISARAPPV 270
>AL034364-4|CAA22250.2| 290|Caenorhabditis elegans Hypothetical
protein W06D4.2 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.44
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 10 ILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLIS--LVEFQSRNILRAAALAEIVLF 183
I +P F+FALL T L +L + S ++A IS + F + +L + ++ I LF
Sbjct: 175 IFLPPFMFALLFDNGILPTPLVSLNRQSFFIAFASISVFITTFLASIVLGSFSIV-ISLF 233
Query: 184 PVVLIMALFCHCGLMSPFV 240
+V + L+ H ++ FV
Sbjct: 234 NIVHVTGLYIHFQVIMQFV 252
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 30.7 bits (66), Expect = 0.76
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +1
Query: 217 CGLMSPFVYYYFVRGGTLRAGTRTPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTSC 396
C +PF + T A + TP+T SA SA PT +L++P+ P +
Sbjct: 1386 CNRFNPFANVPSSKPSTSSAVSATPSTSSAVSAKLPTGKTPGRPVALSTPRSSHKPPQAV 1445
Query: 397 AAWRRPSSNNNSNLCTEKYQVILTNDTTSSAP 492
A RP+ + + ++ +TN + SS P
Sbjct: 1446 VA-PRPNLIRTAPVVP---KITVTNASESSLP 1473
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 30.7 bits (66), Expect = 0.76
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +1
Query: 217 CGLMSPFVYYYFVRGGTLRAGTRTPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTSC 396
C +PF + T A + TP+T SA SA PT +L++P+ P +
Sbjct: 1372 CNRFNPFANVPSSKPSTSSAVSATPSTSSAVSAKLPTGKTPGRPVALSTPRSSHKPPQAV 1431
Query: 397 AAWRRPSSNNNSNLCTEKYQVILTNDTTSSAP 492
A RP+ + + ++ +TN + SS P
Sbjct: 1432 VA-PRPNLIRTAPVVP---KITVTNASESSLP 1459
>Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical
protein M28.1 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +1
Query: 259 GGTLRAGTRTPATRSASSALSPTDSRSAPGCSL-----NSPQC*APPSTSCA 399
G + GTR R +++ + +RS PG +L +SP C PP T+CA
Sbjct: 194 GNAIFGGTRGEELRVFGKSVTSSSTRSRPGSTLPLSTSSSPDC--PPLTTCA 243
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 283 RTPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTSCAAWRRPSS 420
RTPA A+ PT SRS+ +P A P +CA R +S
Sbjct: 41 RTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSAS 86
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 283 RTPATRSASSALSPTDSRSAPGCSLNSPQC*APPSTSCAAWRRPSS 420
RTPA A+ PT SRS+ +P A P +CA R +S
Sbjct: 170 RTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSAS 215
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 3 FVNIGANLFICAATRCFVFLDYP*YSWSK 89
FV++G ++FI A F+F D P SW++
Sbjct: 417 FVSLGVSMFIANAISVFIFTDQP-ASWTE 444
>Z81475-5|CAH04698.1| 130|Caenorhabditis elegans Hypothetical
protein C24H11.9 protein.
Length = 130
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 318 VADGLTQRPWVLAELASVLSSAIDIVCCMAPPVE 419
+AD +TQ ++ E+A ++++AI ++ APP E
Sbjct: 1 MADRMTQLQDMINEMAGLMTNAIGVLQATAPPCE 34
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 297 CCGCTGSGAKRTSTYEVVVHERTHQAAVAEQ 205
CCGC G G KR S ++ + E + ++
Sbjct: 113 CCGCGGGGRKRRSLQKLRIDEANRALGIKKR 143
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 297 CCGCTGSGAKRTSTYEVVVHE 235
CCGC G G KR S ++ + E
Sbjct: 113 CCGCGGGGRKRRSLQKLQIDE 133
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 297 CCGCTGSGAKRTSTYEVVVHE 235
CCGC G G KR S ++ + E
Sbjct: 116 CCGCGGGGRKRRSLQKLQIDE 136
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 245 TTSYVEVRFAPEPVHPQHVPRAPRCR 322
TTSYVE R A E + P P P+ R
Sbjct: 689 TTSYVEDRKAAEQIDPSSTPPEPKRR 714
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 245 TTSYVEVRFAPEPVHPQHVPRAPRCR 322
TTSYVE R A E + P P P+ R
Sbjct: 689 TTSYVEDRKAAEQIDPSSTPPEPKRR 714
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -1
Query: 297 CCGCTGSGAKRTS--TYEVVVHERTHQAA 217
CCGC G G KR S T ++ + E+ + A
Sbjct: 131 CCGCGGGGRKRRSLQTLKIKLAEKVQREA 159
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 PVHPQ-HVPRAPRCRRRTHAA 340
P HP H P +PRCR R+ A+
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPAS 1369
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 PVHPQ-HVPRAPRCRRRTHAA 340
P HP H P +PRCR R+ A+
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPAS 1369
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 297 CCGCTGSGAKRTSTYEVVVHERTHQAAVAEQRHDEYDR 184
CCGC G G KR S + + + ++A +++ + DR
Sbjct: 127 CCGCGGGGRKRRSLQNLRIDD-ANRALGIKRKSSKADR 163
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 297 CCGCTGSGAKRTSTYEVVVHE 235
CCGC G G KR S + + E
Sbjct: 128 CCGCGGGGRKRRSLQNLRIDE 148
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = -1
Query: 270 KRTSTYEVVVHERTHQAAVAEQRHDEYDREQHDLGERRGPEDVPRLELDQGDEQTSHPQR 91
KRT++ E + E++ + A+ + + D+E++D+ ER V ++ D+ D+ +
Sbjct: 196 KRTTSPETNLVEKSKKKAIPDLENHTLDQEKNDVIER-----VEEIQEDEDDDDEQREEV 250
Query: 90 ILTKSIK 70
+ T ++
Sbjct: 251 VTTAPVE 257
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 PVHPQ-HVPRAPRCRRRTHAA 340
P HP H P +PRCR R+ A+
Sbjct: 1226 PTHPHGHSPTSPRCRSRSPAS 1246
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 PVHPQ-HVPRAPRCRRRTHAA 340
P HP H P +PRCR R+ A+
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPAS 1369
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 281 PVHPQ-HVPRAPRCRRRTHAA 340
P HP H P +PRCR R+ A+
Sbjct: 1349 PTHPHGHSPTSPRCRSRSPAS 1369
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 172 SRRAPRPGGCSATGTRPGR*ADEPPTTN 89
S ++PRPGG S + R G A++P + N
Sbjct: 832 SSKSPRPGGPSTSSHRHGSHANDPRSHN 859
>U64603-4|AAO61442.1| 410|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform c
protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 ALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAE----IVLFPVVLIM 201
ALL A ++ I+ T+G + +A LL+ ++ +L + A+A+ +V+ P+ LI
Sbjct: 42 ALLAIAILAMIIMTTVGNALVCLAVLLVRKLKHPQNFLLVSLAVADFFVGLVVMPLALID 101
Query: 202 ALF 210
LF
Sbjct: 102 LLF 104
>U64603-3|AAM15552.1| 422|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform b
protein.
Length = 422
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 ALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAE----IVLFPVVLIM 201
ALL A ++ I+ T+G + +A LL+ ++ +L + A+A+ +V+ P+ LI
Sbjct: 42 ALLAIAILAMIIMTTVGNALVCLAVLLVRKLKHPQNFLLVSLAVADFFVGLVVMPLALID 101
Query: 202 ALF 210
LF
Sbjct: 102 LLF 104
>U64603-2|AAB04582.3| 435|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform a
protein.
Length = 435
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 ALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAE----IVLFPVVLIM 201
ALL A ++ I+ T+G + +A LL+ ++ +L + A+A+ +V+ P+ LI
Sbjct: 42 ALLAIAILAMIIMTTVGNALVCLAVLLVRKLKHPQNFLLVSLAVADFFVGLVVMPLALID 101
Query: 202 ALF 210
LF
Sbjct: 102 LLF 104
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 322 PTDSRSAPGCSLNSPQC*APPSTSCAAWRRPSSNNNSNLCTEKYQVILTNDTT 480
P+ R+ P P +PP R PSS+ +S E+ Q ++T +TT
Sbjct: 24 PSPRRAPPPPPHRKPASLSPPPDDENTIRPPSSSESSENIPEEPQELITPNTT 76
>U23450-5|AAK31466.3| 706|Caenorhabditis elegans Hypothetical
protein C30B5.1 protein.
Length = 706
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 234 RTHQAAVAEQ-RHDEYDREQHDLGERRGPEDVPRLELDQGDEQTSHPQRILTKSIKDS-Q 61
RTH ++ E+ RH YD +H + R+ + + + + Q I K+ +DS
Sbjct: 418 RTHSDSLTERSRHFTYDELKHSMEANAEGPSTCRIGISRSERNSESLQWIGLKTYEDSTD 477
Query: 60 GIRSSV 43
G SV
Sbjct: 478 GFAKSV 483
>AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine
receptor, class w protein108 protein.
Length = 196
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 130 FQSRNILRAAALAEIVLFPVVLIMALFCH---CGLMSP---FVYYYFVRGGTLRAGTRTP 291
+ + + L A++ I++F +L + CH C +S YY +R L TRT
Sbjct: 118 YHTNDGLIIASVDVIIVFASLLTINSTCHFIFCIFLSRQYRSTLYYTLRLHLLVNSTRTE 177
Query: 292 ATRSASSALSPT 327
ATR+ SS P+
Sbjct: 178 ATRNLSSVAVPS 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,975,538
Number of Sequences: 27780
Number of extensions: 277460
Number of successful extensions: 1211
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -