Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021801
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.32 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   0.98 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.7  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   5.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 434 WKLGPRGEPEPTSTCRSARTR 372
           WK  P+G P P+ST  S  T+
Sbjct: 67  WKKSPQGAPSPSSTPSSLPTQ 87



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 433 HCAEGWQVGPGSVHWQRARWQDPRHLGLGRV 525
           +C E  ++GP  VH ++         G G+V
Sbjct: 295 NCQEAERLGPAGVHLRKKNIHSCHIPGCGKV 325


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 315 STSMLSTPAPARPTTLSFTPGPTPLWSLELL 223
           S+S  S P+P+    LS  P P P ++ +++
Sbjct: 126 SSSTSSIPSPSTTDDLSTNPTPPPHYTYQII 156


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -1

Query: 360 APGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWSLEL 226
           A   L  PTP +P +  +M    AP+   +  F   P  L++  +
Sbjct: 232 AASMLPKPTPLVPQQGFNMERLLAPSTEVSAPFFRQPLDLYNFRV 276


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 125 PQRLRNRHH 151
           PQRLR RHH
Sbjct: 21  PQRLRIRHH 29


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 263 SRLVQHLFGHLSC*THNQSV 204
           S  V+HL GHL      QS+
Sbjct: 129 SHTVEHLLGHLQTDLMGQSI 148


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 422 PRGEPEPTSTCRSARTRSA 366
           P  EP+PT T  S  T+++
Sbjct: 397 PTPEPQPTQTTESEPTQAS 415


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 83  GFDRRRGWRQVCRTPQRLRNRHHHQG 160
           G D++  W + CR  ++L  R +  G
Sbjct: 579 GLDQQNQWCKPCRPREQLTWRRNFHG 604


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 83  GFDRRRGWRQVCRTPQRLRNRHHHQG 160
           G D++  W + CR  ++L  R +  G
Sbjct: 471 GLDQQNQWCKPCRPREQLTWRRNFHG 496


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 11/31 (35%)
 Frame = -2

Query: 524 TLPRPRWRGSCQRARCQCTEPGPTCQPSAQW 432
           T PRP W           ++P  T     QW
Sbjct: 406 TTPRPEWARPPSTPSADGSKPVQTTPKPGQW 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,035
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)