Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021801
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 91 7e-19
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 38 0.006
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 33 0.24
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 32 0.32
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 32 0.32
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 0.74
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 31 0.74
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 31 0.74
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical ... 30 1.3
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 30 1.3
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 30 1.3
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 30 1.7
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 29 3.9
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 5.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 5.2
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 5.2
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 5.2
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 6.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.9
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 6.9
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.9
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 28 6.9
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 28 6.9
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 27 9.1
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 27 9.1
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 91.1 bits (216), Expect = 7e-19
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = +2
Query: 281 RAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD 460
RAG GVDNIDV +A + V+N P AN+ SA ELTCTL+L L+RHV A+ ++KAG+W
Sbjct: 75 RAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWA 134
Query: 461 RALYTGSELAGKTLAILAL 517
R + G E+ G+TLA+L L
Sbjct: 135 RKDFMGEEVYGRTLAVLGL 153
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 508 LGLGRVGR*VATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYIT 669
LGLGR+G VA R+ AFGM +IGFDP V+ +Q + + LE IWP ADYIT
Sbjct: 151 LGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIWPQADYIT 204
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 63 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 242
M I VLI D + +C ++L GI T K K +K+ELL+ +P HDA++VRSAT++T
Sbjct: 1 MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60
Query: 243 EVL 251
E+L
Sbjct: 61 ELL 63
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 281 RAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR 415
R G G+DNIDV +A + G+ V +APG + T +L+L L R
Sbjct: 248 RIGYGIDNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFR 292
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 451 QVGPGSVHWQRARWQDPRHLGLGRVGR*VATRMYAFGMNIIGFDPFV 591
QV +V ++ R LG GRVG V R AFG++II +DPFV
Sbjct: 312 QVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFV 358
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 513 AKMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSAL-APGALITP 337
+++AR LPA LP R++L A A ++ I + + L+ L +PGA T
Sbjct: 167 SRLARGLPAPPLPEGLHRTNLSVIGATSAQPE-KSEAEIALSLPVPPLTPLPSPGAQSTA 225
Query: 336 TPFLPAESTSMLSTPAPARPTTL 268
P P + + STP P P L
Sbjct: 226 PPVFPTSTPTPTSTPTPLLPGNL 248
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTTLSFTPGPT 247
PT LP +T+ +TP P TT + TP PT
Sbjct: 414 PTTPLPTTTTTTTTTPKPTTTTTTTTTPAPT 444
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPA---RPTTLSFTPGPT 247
T TP P +T+ +TPAP +PTT + TP PT
Sbjct: 426 TTTP-KPTTTTTTTTTPAPTTTQKPTTTTTTPAPT 459
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 408 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTP 256
R+N ++ SS + P A P P +PA + + STP PA P + +P
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 199
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 408 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTP 256
R+N ++ SS + P A P P +PA + + STP PA P + +P
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 559
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 31.1 bits (67), Expect = 0.74
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Frame = -1
Query: 582 VES-DDVHAEGVHPSGHLSADPAKAKM-ARVLPASSLPVYRARSHLPAFSAVEAGTTWRA 409
VES + ++ P G +++PA A + A A++L A + PA A EA + A
Sbjct: 486 VESATEAPSDSAAPIGPAASEPAPAPIEAPATDAATLETAPAPAAEPA-PAAEAAAGYDA 544
Query: 408 RTNINVQVSSHALSA-----LAPGALITPTPFLPAESTSMLSTPAPARPTT---LSFTPG 253
+++ + + A +A AP A TP P AE T + A P T TP
Sbjct: 545 PSSVPEETPAPAPAADETPAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPA 604
Query: 252 PTP 244
P P
Sbjct: 605 PAP 607
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -1
Query: 393 VQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPT 247
V +++A SA+A A+ TP P AE TPAPA + + P PT
Sbjct: 247 VDGTANAASAVAEPAVETPAPAPAAEE-----TPAPATSSEEAPAPAPT 290
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = -1
Query: 546 PSGHLSADPAKAKMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 367
P A P + A P P Y+A + PA S + A SSH
Sbjct: 1213 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1271
Query: 366 ALAPGALITPTPFLPA 319
AP A TPTP P+
Sbjct: 1272 IAAPQARFTPTPGAPS 1287
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = -1
Query: 546 PSGHLSADPAKAKMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALS 367
P A P + A P P Y+A + PA S + A SSH
Sbjct: 1233 PGAQFGAKPEASSHAPTPPPQPHPSYQAPAPPPALSVFQHSPQG-APITAPPPASSHHEH 1291
Query: 366 ALAPGALITPTPFLPA 319
AP A TPTP P+
Sbjct: 1292 IAAPQARFTPTPGAPS 1307
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPARPTTLSFTPGPT 247
TPT T STP+PA+P T + TP PT
Sbjct: 303 TPTTKKTQSVTPSNSTPSPAKPATPTKTPTPT 334
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 485 ARCQCTEPGPTCQPSAQWKLGPRGEP 408
A CQC PTC P GP G+P
Sbjct: 92 AWCQCEPTKPTCPPGPPGPPGPAGQP 117
>AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical
protein W04B5.3c protein.
Length = 353
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTT--LSFTPGPTP 244
PTP A ++ S P P P++ LS+TP PTP
Sbjct: 262 PTPAGAAYTSPYTSVPMPQPPSSVPLSYTPAPTP 295
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTT--LSFTPGPTP 244
PTP A ++ S P P P++ LS+TP PTP
Sbjct: 262 PTPAGAAYTSPYTSVPMPQPPSSVPLSYTPAPTP 295
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTT--LSFTPGPTP 244
PTP A ++ S P P P++ LS+TP PTP
Sbjct: 262 PTPAGAAYTSPYTSVPMPQPPSSVPLSYTPAPTP 295
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 498 VLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPA 319
V P ++ + + P ++ + ++ A T+ N+ SS + PG T P A
Sbjct: 1171 VQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNM--SSIQSTTSVPGRRFTVQPVSQA 1228
Query: 318 ES--TSMLSTPAPARPTTLSFTPGPTP 244
ES +S +STP P ++ P P P
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVP 1255
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 498 VLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPA 319
V P ++ + + P ++ + ++ A T+ N+ SS + PG T P A
Sbjct: 1171 VQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNM--SSIQSTTSVPGRRFTVQPVSQA 1228
Query: 318 ES--TSMLSTPAPARPTTLSFTPGPTP 244
ES +S +STP P ++ P P P
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVP 1255
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 423 TTWRARTNINVQVSSHALSALAPGALITPTPFLPA--ESTSMLSTPAPARPTTLSFTPGP 250
TT T + V + A A AP A TP P +T+ + T P + TTL P P
Sbjct: 297 TTTTTTTALPPCVYTPAPPATAPPATATPATQTPRTYSTTTPIKTTVPQQWTTLPPGPEP 356
Query: 249 TP 244
TP
Sbjct: 357 TP 358
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 597 SRHERVESDDVHAEGVHP 544
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 530 RPTLP-RPRWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 408
+P P +P G + C+ T P P CQP Q GP G+P
Sbjct: 109 KPGAPGQPGTPGRPPQQPCEPTTP-PPCQPCPQGPPGPPGQP 149
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 597 SRHERVESDDVHAEGVHP 544
S H R+E+DD+ EGV+P
Sbjct: 1476 SDHSRIETDDIQFEGVYP 1493
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 479 CQCTEPGPTCQPSAQWKLGPRGEPEPT 399
CQC P C P G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -1
Query: 369 SALAPGALITPTPFLPAESTSML---STPAPARPTTLSFTPGPTPLWSLELLNAQ 214
S + ++IT +P+ P++STS + +TP+P P T + P+P S + + Q
Sbjct: 858 STSSGSSMITQSPY-PSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQ 911
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 530 RPTLPRPRWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 408
+P + P+ + +C PGP P A GP G+P
Sbjct: 118 QPGVAGPKSHEQQECIKCPAGSPGPAGAPGAPGPQGPNGQP 158
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 530 RPTLP-RPRWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 408
RP P +P G A C+ T P P C+P Q GP G P
Sbjct: 123 RPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 429 AGTTWRARTNINVQVSSHALSALAPGALITP-TPFLP-AESTSMLSTPAPARPTTLS 265
A T+ A TN+ + S P +P T P + STS S+PAP P T S
Sbjct: 241 ASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTS 297
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 470 TEPGPTCQPS-AQWKLGPRGEPEPTSTCRSARTRSAHWR 357
T GPT +P+ A W+ G G TS + R +A WR
Sbjct: 390 TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 530 RPTLP-RPRWRGSCQRARCQCTEPGPTCQPSAQWKLGPRGEP 408
RP P +P G A C+ T P P C+P Q GP G P
Sbjct: 123 RPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTP---APARPTTLSFTPGPT--PLWSLELLN 220
T P P +T+ TP APA PT + TPG T P L LL+
Sbjct: 417 TVAPAAPTVTTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLS 462
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTP---APARPTTLSFTPGPT--PLWSLELLN 220
T P P +T+ TP APA PT + TPG T P L LL+
Sbjct: 417 TVAPAAPTVTTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLS 462
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 384 SSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTLSFTPGPT 247
S+ S AP L TPT P P ST+ + P P PTT P T
Sbjct: 634 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVT 682
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 384 SSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTLSFTPGPT 247
S+ S AP L TPT P P ST+ + P P PTT P T
Sbjct: 690 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVT 738
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -1
Query: 387 VSSHALSALAPGALITPT--PFLPAESTSMLSTPA-PARPTTLSFTPGPT 247
V + S AP L TPT P P ST+ + P P PTT P T
Sbjct: 512 VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVT 561
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = -1
Query: 453 LPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 274
+P F+ + T + SS A P A+ TP P P S + AP P+
Sbjct: 2589 IPLFNEMSGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPETPS 2648
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -1
Query: 363 LAPGALITPTPFLPAESTSMLS---TPAPARPTTLSFTPGPTPL 241
LAP + PTP PA + + PAP P TP P P+
Sbjct: 97 LAPQSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPV 140
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 324 PAESTSMLSTPAPARPTTLSFTPGPTPL 241
P S STP P P + S +P PTPL
Sbjct: 166 PRYSPPPSSTPTPTPPPSSSSSPTPTPL 193
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 518 PRPRWRGSCQRARCQCTEPGPTCQPSA 438
P+PRW S R R + T P PSA
Sbjct: 429 PQPRWTRSQSRGRSEATRRSPPKGPSA 455
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -1
Query: 450 PAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPA-RPT 274
P +SA A A Q S +A AP ++ P LPA + + L APA P
Sbjct: 22 PLYSACSAAVPCAAPAVC--QASVCIPTAAAPPMMMAPPAPLPAYAPAPLPAYAPAPLPA 79
Query: 273 TLSFTPGPTPLWS 235
+ P P P+++
Sbjct: 80 PVFAAPAPAPVFA 92
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -1
Query: 468 RARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPA 289
R+ +L A SA T ++++V V+ +LS PG L P+ E ++
Sbjct: 24 RSVRYLRALSAKNQERTANEHSSVDVAVTQASLSVPRPGILRLPSSDPGEEDPQPSTSSI 83
Query: 288 PARPT 274
P RP+
Sbjct: 84 PHRPS 88
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 599 SADTKGSNPMM-FMPKAYILVATYRPTLPRPRWRGSCQRARCQ-CTEPGPTCQPSAQWKL 426
+A+ KG++P + K ++ V P GS C C PGP P +
Sbjct: 129 AAEVKGNSPAAAYEDKPFVAVGVEEG--PHTATTGSDSEGTCHDCCLPGPPGPPGPPGRP 186
Query: 425 GPRGE 411
GP G+
Sbjct: 187 GPNGK 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,503
Number of Sequences: 27780
Number of extensions: 327758
Number of successful extensions: 1795
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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