Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021801
(669 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 81 9e-16
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 79 2e-15
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 78 5e-15
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 52 5e-07
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 48 6e-06
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 42 4e-04
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 39 0.003
At3g28790.1 68416.m03593 expressed protein 37 0.014
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 34 0.098
At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family... 33 0.23
At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family... 33 0.23
At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family... 33 0.23
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 33 0.23
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 33 0.23
At5g25550.1 68418.m03040 leucine-rich repeat family protein / ex... 32 0.30
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 0.52
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 31 0.69
At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) simil... 30 1.6
At5g41100.2 68418.m04997 expressed protein 29 2.1
At5g41100.1 68418.m04996 expressed protein 29 2.1
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 29 2.8
At3g20570.1 68416.m02604 plastocyanin-like domain-containing pro... 29 2.8
At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family... 29 2.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 2.8
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 3.7
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 3.7
At1g61080.1 68414.m06877 proline-rich family protein 29 3.7
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 4.9
At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative ... 28 4.9
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 28 6.5
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 6.5
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 6.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 6.5
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 27 8.5
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 27 8.5
At1g51700.1 68414.m05826 Dof-type zinc finger domain-containing ... 27 8.5
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 27 8.5
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +2
Query: 281 RAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD 460
RAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A ++KAG+W+
Sbjct: 151 RAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWE 210
Query: 461 RALYTGSELAGKTLAIL 511
R+ Y G L GKTLA++
Sbjct: 211 RSKYVGVSLVGKTLAVM 227
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 84 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDQA 260
+L+ + +G LL +G + +S E+L ++ DAL+VRS T+VT+EV + A
Sbjct: 85 ILVTEKLGEAGVNLLREFGDVDCSY-DLSPEDLKKKVAESDALIVRSGTKVTREVFEAA 142
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 508 LGLGRVGR*VATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYIT 669
+G G+VG VA R GM +I DP+ AD+ + + AD+++
Sbjct: 227 MGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVS 280
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +2
Query: 281 RAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD 460
RAG G+DN+D+ +A + G V+NAP AN ++A E LM +AR+V A ++KAG W
Sbjct: 130 RAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGEWK 189
Query: 461 RALYTGSELAGKTLAIL 511
R Y G L GKTLA+L
Sbjct: 190 RNKYVGVSLVGKTLAVL 206
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 508 LGLGRVGR*VATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYIT 669
LG G+VG VA R GM +I DP+ AD+ + ++ AD+I+
Sbjct: 206 LGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLVSFDEALATADFIS 259
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 165 ISKEELLMEIPNHDALVVRSATQVTKEVLDQA 260
++ EEL ++I DAL+VRS T+V +EV + +
Sbjct: 90 MTPEELNIKISLCDALIVRSGTKVGREVFESS 121
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +2
Query: 281 RAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWD 460
RAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR++ A ++KAG+W
Sbjct: 115 RAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGKWT 174
Query: 461 RALYTGSELAGKTLAIL 511
R Y G L GKTLA+L
Sbjct: 175 RNKYVGVSLVGKTLAVL 191
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 508 LGLGRVGR*VATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYIT 669
LG G+VG VA R GM++I DP+ AD+ + E AD+I+
Sbjct: 191 LGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELVSFEVAISTADFIS 244
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +3
Query: 81 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDQA 260
++L+ + +G +LL Y + +S EEL +I DAL+VRS T+V ++V + +
Sbjct: 48 TILVTEKLGQAGIDLLKKYANVDCSY-DLSLEELCTKISLCDALIVRSGTKVGRDVFESS 106
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 293 GVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAG---RWDR 463
G +N+DV++A K G+ V N PG + EL +L L AR +V A ++ G W
Sbjct: 96 GYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLYEGWLP 155
Query: 464 ALYTGSELAGKTLAIL 511
L+ G+ L G+T+ ++
Sbjct: 156 HLFVGNLLKGQTVGVI 171
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 284 AGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDR 463
AG G D+ID+ +A G+ V G+N +S E +L+L R+ VP + G W+
Sbjct: 126 AGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNV 185
Query: 464 A--LYTGSELAGKTL 502
A Y +L GKT+
Sbjct: 186 AGIAYRAYDLEGKTI 200
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 293 GVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALY 472
G+D ID+ +KG+ V N P +L L+L L R + +++G+W + +
Sbjct: 77 GLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLCECDRYVRSGKWKQGEF 136
Query: 473 -TGSELAGKTLAILAL 517
++ +GK++ I+ L
Sbjct: 137 QLTTKFSGKSVGIIGL 152
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 287 GAGVDNIDVDSAGKKGVGVINAPG---ANALSACELTCTLMLVLARHVVPASTALKAGRW 457
G G+D +D+D+A K G+ V P NA S E+ LML L + +L+
Sbjct: 123 GVGLDGVDIDAATKHGIKVARIPSEGTGNAASCSEMAIYLMLGLLKKQNEMQISLRNRLL 182
Query: 458 DRALYTGSELAGKTLAIL 511
TG L GKT+ IL
Sbjct: 183 GEP--TGDTLLGKTVFIL 198
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 369 SALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPG-PTP 244
S +P TPTP P ST STP P+ PT + TP P P
Sbjct: 271 SGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAP 313
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPARP 277
TPTP P ST STPAP+ P
Sbjct: 295 TPTPSTPTPSTPTPSTPAPSTP 316
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPARPTTLSFTPGPT 247
TPTP P ST STP P+ P + G T
Sbjct: 290 TPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKT 321
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 535 PIGRPCQGQDGEGLASELAASVQSPVPPASLQRSGSWD 422
P+ P G G AS AA+ + P PP S RS WD
Sbjct: 242 PVPGPGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -1
Query: 414 RARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWS 235
+A + ++ V + A S L+P +P P + A++ S +S PA T+ F+P P P+
Sbjct: 138 KALSEVSPSVPADASSHLSP----SPVPIVEAKALSEVSPSVPA-DTSSHFSPAPVPIVE 192
Query: 234 LELLN 220
E L+
Sbjct: 193 AEALS 197
>At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -1
Query: 414 RARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWS 235
+A + ++ V + A S L+P +P P + A++ S +S PA T+ F+P P P+
Sbjct: 138 KALSEVSPSVPADASSHLSP----SPVPIVEAKALSEVSPSVPA-DTSSHFSPAPVPIVE 192
Query: 234 LELLN 220
E L+
Sbjct: 193 AEALS 197
>At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -1
Query: 414 RARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWS 235
+A + ++ V + A S L+P +P P + A++ S +S PA T+ F+P P P+
Sbjct: 138 KALSEVSPSVPADASSHLSP----SPVPIVEAKALSEVSPSVPA-DTSSHFSPAPVPIVE 192
Query: 234 LELLN 220
E L+
Sbjct: 193 AEALS 197
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 32.7 bits (71), Expect = 0.23
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Frame = -1
Query: 546 PSGHLSADPAKAKMARVLPASSLPVYRARSHLPAFSA-VEAG--TTWRARTNINVQVSSH 376
P G A A + LP P A+ A S + G T A + + Q S
Sbjct: 284 PPGQYMAGNAPFSSSTPLPPGQYPAVNAQLSTSAPSVPLPPGQYTAVNAPFSTSTQPVSL 343
Query: 375 ALSALAPG--ALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWSLELLNAQPERR 202
PG AL TP P + T+ + PAP P + P P P + P ++
Sbjct: 344 PPGQYMPGNAALSASTPLTPGQFTTANAPPAPPGPANQTSPPPPPPPSAAAPPPPPPPKK 403
Query: 201 GWVSP 187
G +P
Sbjct: 404 GPAAP 408
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 GFDRRRGWRQVCRTPQR-LRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSSDQR 244
G R+ RQ +R L N+HH++ QD+Q + Y Q G + S SS +R
Sbjct: 1165 GAGRKSRQRQPDLMKKRMLLNKHHNRNQDVQQQNIYSPLQKTSKGPSLSKSSPRR 1219
>At5g25550.1 68418.m03040 leucine-rich repeat family protein /
extensin family protein similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana];
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 433
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -1
Query: 357 PGALITPT--PFLPAESTSM--LSTPAPARPTTLSFTPGPTPLWSL 232
P + I+P+ P PA S + LSTP PARP ++P P P SL
Sbjct: 383 PPSQISPSSQPLAPAPSPTSPPLSTPPPARPCPPVYSPPPPPPLSL 428
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTTLSFTPGPTPL 241
P+P +P+ S S P P+ PT +P PTP+
Sbjct: 50 PSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPV 82
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 363 LAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPG-PTP 244
L+P P+P +P+ S P+P+ PT TP PTP
Sbjct: 32 LSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPSVPTP 72
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 31.1 bits (67), Expect = 0.69
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 339 PTPFLPAESTSMLSTPAPARPTTLSFTPGPTPL 241
P+P++P S S P P+ P+ +P PTP+
Sbjct: 55 PSPYVPTPSVPSPSVPTPSVPSPSVPSPNPTPV 87
>At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) similar
to glutamate decarboxylase (gad) GI:294111 from [Petunia
hybrida]
Length = 494
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 60 KMVVDIKSVLI-VDGVGAKCAELLNAYGIATTTKAKISKEELLMEI 194
++V DI VL +D + +K ++ + GIA K K ++E+LME+
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMGIEGIAENVKEKKMEKEILMEV 476
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Frame = -1
Query: 567 VHAEGVHPSGHLSADPAKAKMARVLPASSLP------VYRARSHLPAFSAVEAGTTWRAR 406
V A+ P +A P A R+ LP RS P A T +
Sbjct: 432 VQAQSSSPRISPTASPPLASSPRINELHELPRPPGQFAPPRRSKSPGLVGHSAPLTAWNQ 491
Query: 405 TNINVQVSSHALSALAP-GALITPTPF-LPAEST-SMLSTPAPARPTTLSFTPGPTPLWS 235
NV VS++ +++ P L+ P + +P+ + +M P P R +P P PL
Sbjct: 492 ERSNVVVSTNIVASPLPVPPLVVPRSYSIPSRNQRAMAQQPLPERNQNRVASPPPLPLTP 551
Query: 234 LELLNAQPERRGWV 193
L+N + R V
Sbjct: 552 ASLMNLRSLSRSHV 565
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Frame = -1
Query: 567 VHAEGVHPSGHLSADPAKAKMARVLPASSLP------VYRARSHLPAFSAVEAGTTWRAR 406
V A+ P +A P A R+ LP RS P A T +
Sbjct: 432 VQAQSSSPRISPTASPPLASSPRINELHELPRPPGQFAPPRRSKSPGLVGHSAPLTAWNQ 491
Query: 405 TNINVQVSSHALSALAP-GALITPTPF-LPAEST-SMLSTPAPARPTTLSFTPGPTPLWS 235
NV VS++ +++ P L+ P + +P+ + +M P P R +P P PL
Sbjct: 492 ERSNVVVSTNIVASPLPVPPLVVPRSYSIPSRNQRAMAQQPLPERNQNRVASPPPLPLTP 551
Query: 234 LELLNAQPERRGWV 193
L+N + R V
Sbjct: 552 ASLMNLRSLSRSHV 565
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 315 STSMLSTPAPARPTTLSFTPGPTP 244
S+S+ +TP+ PT+ F P PTP
Sbjct: 429 SSSLFATPSSTAPTSSLFGPSPTP 452
>At3g20570.1 68416.m02604 plastocyanin-like domain-containing
protein
Length = 203
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 336 TPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWSLELLNAQPERRGWVS 190
+P PA + S S P+P T TP PTP S + N+ +V+
Sbjct: 141 SPPSPAPAPSGESAPSPPVSGTFEMTPAPTPTTSEDTPNSAASSLSFVA 189
>At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -1
Query: 321 AESTSMLSTPAPARPTTLSFTPGPTPLWSLELLNAQPER 205
++ +S ++ P P P LS +P P+P+ ++E A E+
Sbjct: 30 SQDSSSITPPPPPPPPPLSLSPPPSPITAIESNKAIHEK 68
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -1
Query: 384 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
SS LS+L+P ++P+P + S++ S+ +P+ P LS +P P
Sbjct: 74 SSSPLSSLSPS--LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPP 118
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
TPTP +P+ + + + P P+ P +S P PTP
Sbjct: 157 TPTPSVPSPTPPVPTDPMPSPPPPVS-PPPPTP 188
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 387 VSSHALSALAPGALIT--PTPFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
V+S L L P +++ P P P +S+ STP+P+ + T GP P
Sbjct: 554 VTSSPLPPLKPLRILSRPPPPPPPPPISSLRSTPSPSSTSNSIATQGPPP 603
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 342 TPTPFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
TP F P + ++ P P PTT++ P P P
Sbjct: 496 TPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPP 528
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -1
Query: 357 PGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
P A + P P P T+ P P P T + P P P
Sbjct: 530 PRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPP 567
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 492 PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPF-LPAE 316
P+S + S + A + V++ T T + SS + A + PTP P
Sbjct: 671 PSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQAPNLSPVQAPTPVQAPTT 730
Query: 315 STSMLSTPAPARPTTLSFTPGPTPL 241
S+ P P+ + S + PTP+
Sbjct: 731 SSETSQVPTPSSESNQSPSQAPTPI 755
>At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative
similar to GTL1 [Arabidopsis thaliana] GI:2664198
Length = 669
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -1
Query: 444 FSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLS 265
FS +EA T ++++V S A L P + +P P + P + +
Sbjct: 141 FSQLEALNTTPPSSSLDVTPLSVANPILMPSSSSSPFPVFSQPQPQTQTQPPQTHNVSFT 200
Query: 264 FTPGPTPLWSL 232
TP P PL S+
Sbjct: 201 PTPPPLPLPSM 211
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = -1
Query: 357 PGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGPTPLWSLELLNAQP 211
P +++P P + M P P P + P P P+ S ++ P
Sbjct: 50 PPPVMSPMPMMTPPPMPMTPPPMPMTPPPMPMAPPPMPMASPPMMPMTP 98
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 461 GPTCQPSAQWKLGPRGEPEPTSTCRSARTR 372
GP + +W GPRG + ST S+R R
Sbjct: 954 GPPAEGGDRWGSGPRGSDDRRSTFGSSRPR 983
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -1
Query: 369 SALAPGALITPTPFLPAESTSMLSTPAPAR----PTTLSFTPGPTP 244
+A +PG +P+P P + S +TP PA PTT +P P+P
Sbjct: 3 TAPSPGTTPSPSPPSP-PTNSTTTTPPPAASSPPPTTTPSSPPPSP 47
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -1
Query: 357 PGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGP 250
PG+L TP LP S S TP+P PTT S P
Sbjct: 70 PGSL---TPPLPQPSPSAPITPSPPSPTTPSNPRSP 102
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 333 PFLPAESTSMLSTPAPARPTTLSFTPGPTP 244
P LP ST L P P P LS TP P P
Sbjct: 702 PPLPPSSTR-LGAPPPPPPPPLSKTPAPPP 730
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 375 ALSALAPGALITPTPFLPAESTSMLSTPAPARPTTLSFTPGP-TP 244
A SALA TPT P + ++TP P + TP P TP
Sbjct: 16 ATSALAQAPAPTPTATPPPATPPPVATPPPVATPPPAATPAPATP 60
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 300 STPAPARPTTLSFTPGPTPLWSLELLNA 217
+ P TT SFTP P LW L+A
Sbjct: 56 TNPTDDNSTTRSFTPHPPSLWGHHFLSA 83
>At1g51700.1 68414.m05826 Dof-type zinc finger domain-containing
protein (ADOF1) identical to cDNA adof1 mRNA for dof
zinc finger protein, GI:3608260; contains Pfam profile
PF02701: Dof domain, zinc finger
Length = 194
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 409 GSPRGPSFHC--AEGWQVGPGSVHWQRARWQDPRHLGLGRVGR 531
G P G SF A Q+G G V+ +RW LGLG V R
Sbjct: 137 GDPNGASFSSLLASNMQMG-GLVYESGSRWLPGMDLGLGSVRR 178
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 513 AKMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALI 343
AK P+ S + + R L GT W R+N+ S+ ++ PGA I
Sbjct: 152 AKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASI 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,789
Number of Sequences: 28952
Number of extensions: 307530
Number of successful extensions: 1221
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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