Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021800X
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.083
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      19   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      19   9.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.083
 Identities = 19/75 (25%), Positives = 34/75 (45%)
 Frame = +1

Query: 34  AANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVA 213
           A   K E+    +DKD P  + +   E +    E +K K T  ++     +ELN  + + 
Sbjct: 228 AEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTI-KEKYTEDEELNKTKPIW 286

Query: 214 VAKYDEVAQTLEFAE 258
               D+++Q  E+ E
Sbjct: 287 TRNADDISQE-EYGE 300


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 289 ISIAVTCFERSLQIQGFGQLHH 224
           I++A+TC+E SL      +L H
Sbjct: 305 ITLALTCYELSLNKTIQDRLRH 326


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 46  KSEKPASSEDK 78
           +SEKP S +DK
Sbjct: 439 RSEKPESKKDK 449


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 46  KSEKPASSEDK 78
           +SEKP S +DK
Sbjct: 331 RSEKPESKKDK 341


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 85  VYPYPPKRPAFQ 50
           V P PP+ P FQ
Sbjct: 418 VTPTPPEAPLFQ 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,303
Number of Sequences: 336
Number of extensions: 1117
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)