Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021800X
(319 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 61 6e-10
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 61 6e-10
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 61 6e-10
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 61 6e-10
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 60 1e-09
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 59 3e-09
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 59 3e-09
AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens ... 30 1.3
AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation ... 30 1.3
AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein. 30 1.3
D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase pr... 29 2.3
BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase ... 29 2.3
BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase ... 29 2.3
BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation ... 29 3.0
BC002558-1|AAH02558.1| 1064|Homo sapiens jumonji domain containi... 28 5.2
AL451062-1|CAH71021.1| 1064|Homo sapiens jumonji domain containi... 28 5.2
AB014577-1|BAA31652.2| 1073|Homo sapiens KIAA0677 protein protein. 28 5.2
X89572-1|CAA61751.1| 19|Homo sapiens GPIP137 protein. 28 6.9
X74330-1|CAA52377.1| 420|Homo sapiens DNA primase (subunit p48)... 27 9.1
BC005266-1|AAH05266.1| 420|Homo sapiens primase, polypeptide 1,... 27 9.1
AL645617-2|CAI16756.1| 579|Homo sapiens UPF2 regulator of nonse... 27 9.1
AL138898-5|CAH73459.1| 579|Homo sapiens UPF2 regulator of nonse... 27 9.1
AK223391-1|BAD97111.1| 420|Homo sapiens DNA primase small subun... 27 9.1
AK096191-1|BAC04721.1| 579|Homo sapiens protein ( Homo sapiens ... 27 9.1
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +1
Query: 49 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYD 228
S + S+ +T I + ++HKIRN+EK+K KL +D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 229 EVAQTLEFAE 258
EV LEFA+
Sbjct: 169 EVLHNLEFAK 178
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +1
Query: 49 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYD 228
S + S+ +T I + ++HKIRN+EK+K KL +D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 229 EVAQTLEFAE 258
EV LEFA+
Sbjct: 169 EVLHNLEFAK 178
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +1
Query: 49 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYD 228
S + S+ +T I + ++HKIRN+EK+K KL +D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 229 EVAQTLEFAE 258
EV LEFA+
Sbjct: 169 EVLHNLEFAK 178
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +1
Query: 49 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYD 228
S + S+ +T I + ++HKIRN+EK+K KL +D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 229 EVAQTLEFAE 258
EV LEFA+
Sbjct: 169 EVLHNLEFAK 178
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +1
Query: 34 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQK 207
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL ++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 208 VAVAKYDEVAQTLEFAE 258
AV+KY EV LEFA+
Sbjct: 94 DAVSKYQEVTNNLEFAK 110
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +1
Query: 88 IRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEVAQTLEFAE 258
++QI+ +I+ K+RNLEK+K KL ++ G+ LN DQ AV+KY EV LEFA+
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAK 57
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1
Query: 49 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYD 228
S + S+ + I + ++HKIRN+EK+K KL +D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 229 EVAQTLEFAE 258
EV LEFA+
Sbjct: 134 EVLHNLEFAK 143
>AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens
cDNA FLJ14450 fis, clone HEMBB1001736, weakly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 9. ).
Length = 585
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 109 IEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEVAQTLEFAEI 261
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE E+
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLEL 583
>AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A protein.
Length = 585
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 109 IEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEVAQTLEFAEI 261
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE E+
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLEL 583
>AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein.
Length = 609
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 109 IEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEVAQTLEFAEI 261
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE E+
Sbjct: 557 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLEL 607
>D30658-1|BAA06338.1| 739|Homo sapiens glycyl tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +1
Query: 7 SCCQ*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGK 186
SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ KA
Sbjct: 40 SCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDKAVA 96
Query: 187 ELNSDQKVAVAK 222
EL + ++V AK
Sbjct: 97 ELKARKRVLEAK 108
>BC007755-1|AAH07755.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +1
Query: 7 SCCQ*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGK 186
SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ KA
Sbjct: 40 SCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDKAVA 96
Query: 187 ELNSDQKVAVAK 222
EL + ++V AK
Sbjct: 97 ELKARKRVLEAK 108
>BC007722-1|AAH07722.1| 739|Homo sapiens glycyl-tRNA synthetase
protein.
Length = 739
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +1
Query: 7 SCCQ*RMPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGK 186
SC +P+AA+ S A +E+ P+R + +R L++ K+ D+ KA
Sbjct: 40 SCAPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQV---DVDKAVA 96
Query: 187 ELNSDQKVAVAK 222
EL + ++V AK
Sbjct: 97 ELKARKRVLEAK 108
>BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A, 65kDa protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 109 IEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEVAQTLE 249
I+ KI+NL+K+ + ++ GK+L +Q + K + Q LE
Sbjct: 533 IDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELE 579
>BC002558-1|AAH02558.1| 1064|Homo sapiens jumonji domain containing 2A
protein.
Length = 1064
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 10 CCQ*RMPSAANAKSEKPAS--SEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS 159
C R P+A + + A + D P +T HKI NLE+ K L S
Sbjct: 847 CSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS 898
>AL451062-1|CAH71021.1| 1064|Homo sapiens jumonji domain containing 2A
protein.
Length = 1064
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 10 CCQ*RMPSAANAKSEKPAS--SEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS 159
C R P+A + + A + D P +T HKI NLE+ K L S
Sbjct: 847 CSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS 898
>AB014577-1|BAA31652.2| 1073|Homo sapiens KIAA0677 protein protein.
Length = 1073
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 10 CCQ*RMPSAANAKSEKPAS--SEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS 159
C R P+A + + A + D P +T HKI NLE+ K L S
Sbjct: 856 CSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS 907
>X89572-1|CAA61751.1| 19|Homo sapiens GPIP137 protein.
Length = 19
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1
Query: 88 IRQIMTIIEHKIRNLEKRK 144
++QI+ +I+ K+RNLEK+K
Sbjct: 1 MKQILGVIDKKLRNLEKKK 19
>X74330-1|CAA52377.1| 420|Homo sapiens DNA primase (subunit p48)
protein.
Length = 420
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 55 KPASSEDKDTPIRQIMTIIEHKIRNLEK-RKSKLTS*RDLQK 177
K + + K T + + + EH + NL+K RK +L DLQK
Sbjct: 377 KHRTRDYKKTSLAPYVKVFEHFLENLDKSRKGELLKKSDLQK 418
>BC005266-1|AAH05266.1| 420|Homo sapiens primase, polypeptide 1,
49kDa protein.
Length = 420
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 55 KPASSEDKDTPIRQIMTIIEHKIRNLEK-RKSKLTS*RDLQK 177
K + + K T + + + EH + NL+K RK +L DLQK
Sbjct: 377 KHRTRDYKKTSLAPYVKVFEHFLENLDKSRKGELLKKSDLQK 418
>AL645617-2|CAI16756.1| 579|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 43 AKSEKPASSEDKDT-PIRQIMTIIEHK-IRNLEKRKS--KLTS*RDLQKAGKELNSDQKV 210
A+ +KPAS E+KD+ P + E + + + E+ K KLT+ +++ KA +E ++
Sbjct: 3 AERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEESKKKEEE 62
Query: 211 AVAKYDE 231
K+ E
Sbjct: 63 EKKKHQE 69
>AL138898-5|CAH73459.1| 579|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 43 AKSEKPASSEDKDT-PIRQIMTIIEHK-IRNLEKRKS--KLTS*RDLQKAGKELNSDQKV 210
A+ +KPAS E+KD+ P + E + + + E+ K KLT+ +++ KA +E ++
Sbjct: 3 AERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEESKKKEEE 62
Query: 211 AVAKYDE 231
K+ E
Sbjct: 63 EKKKHQE 69
>AK223391-1|BAD97111.1| 420|Homo sapiens DNA primase small subunit,
49kDa variant protein.
Length = 420
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 55 KPASSEDKDTPIRQIMTIIEHKIRNLEK-RKSKLTS*RDLQK 177
K + + K T + + + EH + NL+K RK +L DLQK
Sbjct: 377 KHRTRDYKKTSLAPYVKVFEHFLENLDKSRKGELLKKSDLQK 418
>AK096191-1|BAC04721.1| 579|Homo sapiens protein ( Homo sapiens
cDNA FLJ38872 fis, clone MESAN2013674, highly similar to
Homo sapiens regulator of nonsense transcripts 2 (RENT2)
mRNA. ).
Length = 579
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 43 AKSEKPASSEDKDT-PIRQIMTIIEHK-IRNLEKRKS--KLTS*RDLQKAGKELNSDQKV 210
A+ +KPAS E+KD+ P + E + + + E+ K KLT+ +++ KA +E ++
Sbjct: 3 AERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEESKKKEEE 62
Query: 211 AVAKYDE 231
K+ E
Sbjct: 63 EKKKHQE 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,485,363
Number of Sequences: 237096
Number of extensions: 566788
Number of successful extensions: 1155
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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