Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021800X
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    32   0.10 
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    32   0.10 
U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical pr...    29   0.96 
Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical pr...    27   2.9  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    27   2.9  
U29488-11|AAK93842.1|  753|Caenorhabditis elegans Hypothetical p...    27   2.9  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AL110484-20|CAB54412.1|  195|Caenorhabditis elegans Hypothetical...    27   3.9  
Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z82280-2|CAB05262.1|  161|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z29095-7|CAA82352.2|  319|Caenorhabditis elegans Hypothetical pr...    26   6.8  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    26   6.8  
U49945-4|AAC47924.1|  535|Caenorhabditis elegans Hypothetical pr...    25   8.9  

>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 49   SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*R-DLQKAGKELNSDQKVAVAKY 225
            +E   S EDK   + +I   +E ++  LE+   +    R D++KA +++  D KVA    
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079

Query: 226  DEVAQ 240
            DE+ +
Sbjct: 1080 DEITK 1084


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 49   SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*R-DLQKAGKELNSDQKVAVAKY 225
            +E   S EDK   + +I   +E ++  LE+   +    R D++KA +++  D KVA    
Sbjct: 1020 NEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENI 1079

Query: 226  DEVAQ 240
            DE+ +
Sbjct: 1080 DEITK 1084


>U41549-3|AAA83283.2|  245|Caenorhabditis elegans Hypothetical
           protein F22F1.3 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 0.96
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +2

Query: 38  LMQNLKSRPLRRIRIHQFDKL 100
           L  N KSR  RRIRIH  DKL
Sbjct: 129 LKPNAKSRITRRIRIHVIDKL 149


>Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical
           protein F45G2.3 protein.
          Length = 639

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 28  PSAANAK-SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKS 147
           PS    K + K   ++D+D  ++Q M  IE + + ++KRK+
Sbjct: 417 PSVKRVKVASKTTPNDDEDDIVKQFMADIEKEKKAIKKRKN 457


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +1

Query: 25  MPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQ 204
           +P     K E+    ED+   + +    +  K+++  KR+SK    R   ++ K++ S++
Sbjct: 163 LPELVEKKREEKRQQEDQKAVVLEKRKPVTQKVQDHLKRRSKSPIGRGKDQSDKDIISNK 222

Query: 205 K 207
           K
Sbjct: 223 K 223


>U29488-11|AAK93842.1|  753|Caenorhabditis elegans Hypothetical
           protein C56C10.11 protein.
          Length = 753

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 127 YEFYAQ*SS*FVELVYPYPPKRPAFQILH 41
           YE++ + ++ F  L+ PY P  P F   H
Sbjct: 163 YEYFTRVAAVFSPLIAPYSPTHPPFSTSH 191


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = +1

Query: 40  NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVA 219
           NAK +     E+K T I++    ++   + ++  K +L   +   ++ +EL S QK    
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424

Query: 220 KYDEVAQTLEFAE 258
           K  E+ + L+ A+
Sbjct: 425 KIQELEKELQNAQ 437


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 18/73 (24%), Positives = 36/73 (49%)
 Frame = +1

Query: 40  NAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVA 219
           NAK +     E+K T I++    ++   + ++  K +L   +   ++ +EL S QK    
Sbjct: 367 NAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQELASSQK--AD 424

Query: 220 KYDEVAQTLEFAE 258
           K  E+ + L+ A+
Sbjct: 425 KIQELEKELQNAQ 437


>AL110484-20|CAB54412.1|  195|Caenorhabditis elegans Hypothetical
           protein Y38E10A.20 protein.
          Length = 195

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = -3

Query: 251 NSRVWATSSYLATATF*SEFSSFPAFCRSRYDVS 150
           NS ++ ++SY +++ F  +FS+FP   R + + +
Sbjct: 120 NSSIFLSNSYSSSSCFLLQFSNFPGVLRGQLNAA 153


>Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical
           protein K01C8.9 protein.
          Length = 556

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +1

Query: 61  ASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RD--LQKAGKE-LNSDQKVAVAKYDE 231
           A  E +   +RQ       KI  +EKRK+ L +  +  + KA K+    D+KVA A   E
Sbjct: 65  AEQEREKIKVRQEAAKEAAKIHRIEKRKNNLPANFESMVAKASKQGTEFDKKVASAAEHE 124

Query: 232 VAQTLE 249
              TL+
Sbjct: 125 KFNTLD 130


>Z82280-2|CAB05262.1|  161|Caenorhabditis elegans Hypothetical
           protein R05A10.2 protein.
          Length = 161

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 136 KRKSKLTS*RDLQKAGKELNSDQKVAVAKYDEV 234
           K+  K  +  DL+K  K LNSD+K  V K   V
Sbjct: 79  KKADKPAAENDLEKFDKGLNSDKKEYVQKRSHV 111


>Z29095-7|CAA82352.2|  319|Caenorhabditis elegans Hypothetical
           protein R10E11.7 protein.
          Length = 319

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 263 EISANSRVWATSSYLATATF*SEFSSFPAFCRSRYDV 153
           ++  +S++W  +S+  TA F      + + CR  YD+
Sbjct: 120 QLFTSSKIWLYTSFHMTANFACLIIPYLSECRINYDI 156


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 31  SAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGK 186
           S+    S  PAS+ D DT +R+I   +E  +++ ++  + +   R   + G+
Sbjct: 9   SSRAMSSASPASASDSDTSVRKIGKALETYLKHSQQHVAMMEKHRAEFETGR 60


>U49945-4|AAC47924.1|  535|Caenorhabditis elegans Hypothetical
           protein C02H7.1 protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +1

Query: 46  KSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTS*RDLQKAGKELNSDQKVAVAKY 225
           KSEK  S+E+K+   +   +   HK  +    KS   S ++ +K  ++  +D+K   +K 
Sbjct: 157 KSEKKKSAEEKEKKKKSSSSKERHKSSDRSSEKSSEKSSKEKKK--EKSTTDEKPKKSKK 214

Query: 226 D 228
           D
Sbjct: 215 D 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,198,166
Number of Sequences: 27780
Number of extensions: 99317
Number of successful extensions: 314
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)