Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021798
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 1e-58
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 1e-58
SB_56| Best HMM Match : Actin (HMM E-Value=0) 223 1e-58
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 223 1e-58
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 9e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 116 3e-26
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 81 7e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 79 3e-15
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 6e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 3e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 44 9e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.23
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 33 0.30
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 33 0.30
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.30
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 32 0.40
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 31 0.70
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.70
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.93
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.1
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.9
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 28 6.5
SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 8.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 223 bits (545), Expect = 1e-58
Identities = 114/153 (74%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 125 bits (302), Expect = 3e-29
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAG
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG 183
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 223 bits (545), Expect = 1e-58
Identities = 114/153 (74%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY P P
Sbjct: 119 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 178
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
Score = 122 bits (295), Expect = 2e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 223 bits (545), Expect = 1e-58
Identities = 114/153 (74%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY P P
Sbjct: 119 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 178
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
Score = 124 bits (298), Expect = 9e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 223 bits (545), Expect = 1e-58
Identities = 114/153 (74%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFN+PAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect(2) = 2e-52
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLY 508
MTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 120 MTQIMFETFNSPAMYVAIQAVLSLY 144
Score = 125 bits (302), Expect = 3e-29
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYE--GYA 588
SGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 40.7 bits (91), Expect(2) = 2e-52
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +2
Query: 629 DLTDYLMKILTERGYSFTTTAEREIVRD 712
D + + I ERGYSFTTTAEREIVRD
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRD 185
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (298), Expect = 9e-29
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 89.8 bits (213), Expect = 2e-18
Identities = 54/97 (55%), Positives = 57/97 (58%)
Frame = +2
Query: 422 NREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 601
N + M +IMFETFN+PAMYVAIQAVLSLY P P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 602 SCVWT*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 174
Score = 80.2 bits (189), Expect = 2e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAG
Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAG 145
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 349
+SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 116 bits (278), Expect = 3e-26
Identities = 61/128 (47%), Positives = 81/128 (63%)
Frame = +2
Query: 329 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 508
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 509 RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVRDLTDYLMKILTERGYSFTTT 688
+ + P P + RDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 689 AEREIVRD 712
AE++I+RD
Sbjct: 2249 AEQQIIRD 2256
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAG
Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAG 2227
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 203
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 112 bits (270), Expect = 2e-25
Identities = 62/151 (41%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +2
Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 439
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 440 QIMFETFNTPAMYVAIQAVLSLY-RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 616
++MFE + +Y+AIQAVL+LY + ++ V + V+ CP P +
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHI-CPVYEGFALPHLTRRLD 183
Query: 617 *PVRDLTDYLMKILTERGYSFTTTAEREIVR 709
RD+T YL+K++ RGY+F TA+ E VR
Sbjct: 184 IAGRDITKYLIKLMLLRGYAFNHTADFETVR 214
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +1
Query: 514 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 254
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 81.4 bits (192), Expect = 7e-16
Identities = 48/90 (53%), Positives = 53/90 (58%)
Frame = +2
Query: 443 IMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 622
IMFE FN+PA+YVAIQAVLSLY + P P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 623 VRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMK++TERGYSFTTTAEREIVRD
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRD 90
Score = 79.0 bits (186), Expect = 4e-15
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAG
Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAG 61
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 79.4 bits (187), Expect = 3e-15
Identities = 44/111 (39%), Positives = 61/111 (54%)
Frame = +2
Query: 377 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVS 556
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLY
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 557 PTPCPSTRDTHSPTPSCVWT*PVRDLTDYLMKILTERGYSFTTTAEREIVR 709
P P RD++ YL +L + G+ F +++E EIVR
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVR 236
Score = 71.3 bits (167), Expect = 7e-13
Identities = 28/38 (73%), Positives = 37/38 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AG
Sbjct: 171 TGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAG 208
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 466
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 467 PAMYVAIQAVLSLY 508
PA ++ +VL+ +
Sbjct: 63 PAFFLCKNSVLTAF 76
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 502 AVPSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
A +GR+ G+V+DSG + VP+++GY L AI+R LAG
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 203
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 72 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 242
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 243 GDEARAK 263
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 281 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 394
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 523 TGIVLDSGDGVSHTVPI 573
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 523 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
TG V+DSGDGV+H +P+ EGY + I + +AG
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 95
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 200 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 84
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 278 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 430
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 31.5 bits (68), Expect = 0.70
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +1
Query: 361 ACRPRGTPRPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVPSGRTTGIVLD 540
ACR R PR P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 541 SGDGVSHTVPI 573
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 447 CSKHSTRPPCTSPSKPCSRCTVRSYHRYRAG 539
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 403 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVP 510
SP P+ R D+P V A HV HPSR P
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSRNAESP 300
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +2
Query: 383 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPT 562
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 563 PCPSTRDTHSPTP 601
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -2
Query: 266 LFCSCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 102
+F +CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 101 RGNFFVAHLELVK 63
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 170 VPLDRGKAPPSGRDGRYGTEGLLCRR*GKSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 343
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 344 TFYN 355
T N
Sbjct: 497 TCPN 500
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 409 QPQGQQRE-DDPDHVRNIQHARHVRRHPSRALAVPSGRTTGIV 534
Q QG Q + + P V + H R RHP+ L P + GI+
Sbjct: 2325 QQQGVQMQVNQPQGVMEVSHQRFALRHPAPGLPPPPQQVPGIL 2367
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +2
Query: 356 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVP 523
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 524 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVW 613
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNE 358
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 90 EVAALVVDNGSGMCKAGFAGDDAPRAV 170
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 350 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPV 517
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 350 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPV 517
Y EL V +PV TE + + N + Q+M T P Y + V + Y PV
Sbjct: 475 YTELVVFTRYNPVRYTELVVFTRHNPVRYAQLMVFTRYNPVRYAQL-IVFTRYNPV 529
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 266 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 123
L C C + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +2
Query: 344 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVP 523
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 524 PVSCWTPATVSPTPCPSTRDTHSP 595
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +2
Query: 356 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVP 523
E VAPE L E P+ + +T P VAI++ L+L V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 524 PVSCWTPATVSPTPCPSTRDTHSP 595
+ T TV+P + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +2
Query: 401 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTR 580
A P A + + +NTP ++ + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 581 DTHSP 595
P
Sbjct: 946 QPQPP 950
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 362 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWT 541
++A + +P + E N K + +K+ Q M +T + + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 542 PATVSPTPCPSTRDTHSP-TPSCV 610
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 421 QQREDDPDHVRNIQHARHVRRHPSRALAVPSGRTTGIVLDSGDGVSHTVPIYEGYALPH 597
Q+R D V N+ H R + +A+ SG+T+ S D V PI G LPH
Sbjct: 210 QERRSTHDVVPNLGHGVASRHAQASPIAMTSGKTS----QSTDAVCRRPPIERG-TLPH 263
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 452 ETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRD 583
+ + P + +Q +++ P + P +C TP +SP T D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 486 SKPCSRCTVRSYH--RYRAGLRRRCLPHRAHLRGIRTPP 596
S PC+ C H + L R PHR LRG +T P
Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTP 390
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +1
Query: 367 RPRGTPRPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVP------SGRTTG 528
R R P PA+ ++R P I H R VR+ RA AV SG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 529 IVLDSGDGVS 558
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,581,928
Number of Sequences: 59808
Number of extensions: 660342
Number of successful extensions: 2517
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2500
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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