Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021798
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 224 4e-59
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 224 4e-59
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 224 4e-59
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 224 4e-59
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 224 4e-59
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 224 4e-59
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 224 4e-59
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 224 4e-59
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 224 4e-59
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 224 4e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 219 2e-57
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 1e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 131 6e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 131 6e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 130 1e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 130 1e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 1e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.012
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.012
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 31 0.82
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.5
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 4.4
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 28 5.8
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.8 bits (193), Expect = 4e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 128 bits (309), Expect = 4e-30
Identities = 56/62 (90%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.8 bits (193), Expect = 4e-16
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 76 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 135
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 136 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 168
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 102 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 139
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 210 MVGMGQKDSYVGDEARAK 263
MVGMGQKDSYVGDEA++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 106 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 165
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 166 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 198
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 132 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 132 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 169
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 224 bits (548), Expect = 4e-59
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
MTQIMFETFNTPAMYVAIQAVLSLY P P
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
Query: 614 T*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 146 SGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 219 bits (534), Expect = 2e-57
Identities = 113/154 (73%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 433
+SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREK
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
Query: 434 MTQIMFETFNTPAMYVAIQAVLSLYRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 610
MTQIMFETFNTPAMYV IQAVLSLY + T V+ T P P
Sbjct: 119 MTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT-VPIYEGYALPHAIQR 177
Query: 611 WT*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RDLTDY+MKILTERGY+FTTTAEREIVRD
Sbjct: 178 LDLAGRDLTDYMMKILTERGYTFTTTAEREIVRD 211
Score = 124 bits (300), Expect = 5e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +3
Query: 84 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 263
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
SGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAG
Sbjct: 145 SGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAG 182
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (321), Expect = 1e-31
Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 430
+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 431 KMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 610
+ +I FETFN PA+Y+ +QAVLSLY P +
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181
Query: 611 WT*PVRDLTDYLMKILTERGYSFTTTAEREIVRD 712
RD+T+YL +L GY F + E EIVR+
Sbjct: 182 MDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVRE 215
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +1
Query: 511 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAG
Sbjct: 149 TGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAG 186
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 260
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 6e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDMEKI 334
+SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 257
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 258 AK 263
+K
Sbjct: 61 SK 62
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 254 KSKRGILTLKYPIEHGIVTNWDDM 325
+SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 115 bits (276), Expect = 4e-26
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +2
Query: 263 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 439
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 440 QIMFETFNTPAMYVAIQAVLSLY-RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 616
Q+MFE + ++YVA+QAVL+LY + ++ V + V+ CP +
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHI-CPVYEGFALHHLTRRLD 183
Query: 617 *PVRDLTDYLMKILTERGYSFTTTAEREIVR 709
RD+T YL+K+L +RGY+F +A+ E VR
Sbjct: 184 IAGRDITKYLIKLLLQRGYNFNHSADFETVR 214
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 514 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
G TG+V+DSGDGV+H P+YEG+AL H RLD+AG
Sbjct: 150 GLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAG 186
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 102 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 251
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 2e-21
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +2
Query: 275 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 454
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 455 TFNTPAMYVAIQAVLSL 505
+FN P +Y+A+QAVL+L
Sbjct: 140 SFNVPGLYIAVQAVLAL 156
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +1
Query: 523 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
TG+V+DSGDGV+H +P+ +GY + I + +AG
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAG 204
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 78 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 185
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +2
Query: 290 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 469
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 470 AMYVAIQAVLSLY 508
A Y++ VLS +
Sbjct: 154 AYYLSKNVVLSCF 166
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +1
Query: 514 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
GRT G+++DSG + VP+++GYA+ HA+++ + G
Sbjct: 169 GRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGG 205
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 87 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 185
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 460
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 287 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 460
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 455 TFNTPAMYVAIQAVLSLYRPVVPPVSCWT--PATVSPTPCPSTRDTHSPTPSC 607
T +P+ V SL P VPP T P TVS P PS PT SC
Sbjct: 351 TIPSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 512 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVRDLTDYLMKILTERGYSFTTTA 691
P++PP PA V T P+TR+T P P + R T + + T TTT+
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVPIFITN---RPETTTVRAVRTTTKKVETTTS 151
Query: 692 EREIVRD 712
+ + R+
Sbjct: 152 DDVVARE 158
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +2
Query: 371 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPAT 550
P P + +P P T + T +T A + P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 551 VSPTPCPSTRDT 586
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +2
Query: 371 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPAT 550
P P + +P P T + T +T A + P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 551 VSPTPCPSTRDT 586
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 182 RGKAPPSGRDGRYGTEGLLCRR*GKSKRG 268
RGKA +GRDGR G EG R + +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 521 PPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVRDLTDYLMKILTERGYSFTTT 688
PP S TP + T P T T SP+ S T PV+ T + + S +TT
Sbjct: 226 PPSSSTTPVQTTTTTAPETTSTESPSSS---TTPVQTTTTTAPETTSTEPPSSSTT 278
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 521 PPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVRDLTDYLMKILTERGYSFTTT 688
PP S TP + T P T T SP+ S T PV+ T + + S +TT
Sbjct: 502 PPSSSTTPVQTTTTTAPETTSTESPSSS---TTPVQTTTTTAPETTSTEPPSSSTT 554
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 425 REKMTQIMFETFN------TPAMYVAIQAVLSLYRPVVPPVSCWTPATVS 556
R++ Q+ F+T + TP + VA+ +S + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 425 REKMTQIMFETFN------TPAMYVAIQAVLSLYRPVVPPVSCWTPATVS 556
R++ Q+ F+T + TP + VA+ +S + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +2
Query: 416 KANREKMTQIMFETFNTPAMYVAIQAVLSLYRPVVPPVSCWTPATVSPTPCPSTRDTHSP 595
K+ +E T I F T TP + + +VP S T T + TP P T T P
Sbjct: 428 KSTKEPKTTI-FTT--TPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 596 TPSCVWT 616
T + T
Sbjct: 485 TTTTYTT 491
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 132 KAGFAGDDAPRAVFPSIVGRPRHQG 206
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,990,408
Number of Sequences: 27780
Number of extensions: 441419
Number of successful extensions: 2085
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2060
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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