Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021797
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    25   1.9  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   1.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.6  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +3

Query: 522 ASSPIATKPISQPAI 566
           A++P+ATK I+QPA+
Sbjct: 91  AAAPVATKVIAQPAV 105


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 369 FHAVNEPSVEHNSAAYIAQSNSLLENEHI 283
           FH +NEP++ HN    +  SN+   N H+
Sbjct: 169 FHQMNEPNMPHN----VNYSNTGFNNSHM 193


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 403  KADIEIEADEETYRELARR 459
            KA + +E +EE Y+E+ RR
Sbjct: 984  KAMVLLEREEEQYKEVMRR 1002


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,284
Number of Sequences: 2352
Number of extensions: 11300
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)