Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021796
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.7  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   7.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 298 GDERASFVTSMASIWSLTLDCRSADAALASRTS 200
           GD++   + + A++W+   D  S D  L  R +
Sbjct: 508 GDKKGQVLGAEAALWTEQADSASVDTRLWPRAA 540


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 476 WPHSIHARQPNLCKRDYLRLFGNTGYCAACNKVIPAFEMVM 598
           WP++++ R P+ C        GN   C   ++  P +E+VM
Sbjct: 329 WPYTLYFRMPHKCN-------GNAHNCP--SRSHPVWEIVM 360


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 476 WPHSIHARQPNLCKRDYLRLFGNTGYCAACNKVIPAFEMVM 598
           WP++++ R P+ C        GN   C   ++  P +E+VM
Sbjct: 336 WPYTLYFRMPHKCN-------GNAHNCP--SRSHPVWEIVM 367


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 386 HRAVSLEGFGSTVARGLFEVRLLRLPTRGGW 478
           H+A +LE     ++ GL  +RL+ +   G W
Sbjct: 311 HKATTLETVYYFISLGLLILRLVSVCFYGSW 341


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 641 SKRSIPDDKRYCEPSSPFRTRGSLYYKRH 555
           SK  I +DKR   P  PF T     YK H
Sbjct: 221 SKVHIREDKRLTCPKCPFITE----YKHH 245


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 220 PHQPSGSPVLSSKCWPWM 273
           P  P G P+     +PWM
Sbjct: 119 PAAPGGQPIPDIPRYPWM 136


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 220 PHQPSGSPVLSSKCWPWM 273
           P  P G P+     +PWM
Sbjct: 178 PAAPGGQPIPDIPRYPWM 195


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 220 PHQPSGSPVLSSKCWPWM 273
           P  P G P+     +PWM
Sbjct: 119 PAAPGGQPIPDIPRYPWM 136


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 220 PHQPSGSPVLSSKCWPWM 273
           P  P G P+     +PWM
Sbjct: 178 PAAPGGQPIPDIPRYPWM 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,532
Number of Sequences: 336
Number of extensions: 3428
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)