Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021796
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 97 1e-20
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 75 6e-14
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 71 1e-12
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 66 2e-11
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 66 3e-11
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 56 2e-08
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 56 3e-08
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 37 0.014
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 36 0.044
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 35 0.058
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 35 0.058
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 34 0.10
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 32 0.41
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 32 0.54
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 31 0.95
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 29 3.8
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 29 5.1
SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9) 29 5.1
SB_16643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016) 28 8.9
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 97.5 bits (232), Expect = 1e-20
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +2
Query: 509 LCKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLC 688
LCKRDYLRLFG G C+ CNK I AFE+VMRAR+N YH+ECF C +C R VG+ F
Sbjct: 66 LCKRDYLRLFGIPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFH 125
Query: 689 ENKILC 706
+NK+LC
Sbjct: 126 DNKVLC 131
Score = 77.4 bits (182), Expect = 1e-14
Identities = 28/55 (50%), Positives = 43/55 (78%)
Frame = +3
Query: 345 PPQPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLI 509
P + ++C C++ I+++Y+L+AL WHE CLKC CCD RLG++G +LY++ANLI
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLI 65
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 491 HARQPNLCKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVG 670
H + N Y +L+GN+G CA C K+IPA E+VM+ VYHL CF C C+++ G
Sbjct: 688 HTNESNGRTTTY-KLYGNSGACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPG 746
Query: 671 DRFYLCENKILCEYD 715
DRF++ ++ CE D
Sbjct: 747 DRFHVVNGRLFCEND 761
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 74.9 bits (176), Expect = 6e-14
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +2
Query: 512 CKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCE 691
C+ DY ++FG C+ C K IPA E+VMRA NVYHL CF C C H G F L +
Sbjct: 93 CRTDYEKVFGTK--CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKD 150
Query: 692 NKILCEYDY 718
NK+ C+ D+
Sbjct: 151 NKLYCKADF 159
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 360 ICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCR 464
IC GC++ I +R+L+K +D+ WHE CL+ CC CR
Sbjct: 45 ICTGCNEPIEDRFLMKVVDEAWHESCLQ--CCICR 77
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 509 LCKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLC 688
LC+ DY R F + C++C++ I + E+VMRAR VYH+ CFAC +C G+ F +
Sbjct: 296 LCREDYYRRF-SVKKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMR 354
Query: 689 ENKILCEYDYEE 724
+I C+ DYEE
Sbjct: 355 GIRIYCKEDYEE 366
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +3
Query: 351 QPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLISARE 521
Q +CAGC I ER+ L A+DQ WH DCLKC C+ RL + T +++ +I RE
Sbjct: 244 QQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRL-DNELTCFSKDGVILCRE 299
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEYDY 718
C+ C K IPA E+VMRA NVYHL CF C C H G F L +NK+ C+ D+
Sbjct: 7 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADF 61
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +2
Query: 512 CKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCE 691
CK DY R FG CA C + I A + V RA++ VYHL CFAC C + G+ F L +
Sbjct: 151 CKADYARQFGTK--CARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKD 208
Query: 692 NKILCEYDYEE 724
+LC+ Y E
Sbjct: 209 GHVLCKLHYLE 219
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 351 QPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTR 497
Q + C GC I +RYL+K + WH CLKC C LG T YT+
Sbjct: 98 QGERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREA-TCYTK 145
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 512 CKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDR-FYLC 688
CK D+ R +G C+ C++ I +MV RA+ V+H++CF C C + GD +Y+
Sbjct: 52 CKTDFYRRYGTK--CSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIG 109
Query: 689 ENKILCEYDY 718
+ +C DY
Sbjct: 110 DGSFICRDDY 119
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 357 QICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGE 473
Q CAGC I +++LLK LD +WH C++C C C L E
Sbjct: 3 QQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTE 41
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 533 LFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEY 712
LFG CA C+ + VMRAR+ +YH++CF C C + GD F L E+ + C+
Sbjct: 79 LFGTK--CAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKA 136
Query: 713 DYE 721
D+E
Sbjct: 137 DHE 139
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 363 CAGCSKVITER-YLLKALDQLWHEDCLKCGCCDCRL 467
CA CS ++ ++++A ++++H DC +C C +L
Sbjct: 84 CAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQL 119
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 348 PQPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRL 467
P CAGC + I L AL++ WH C C C C L
Sbjct: 84 PYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLL 123
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYL-CENKILCEYDYEE 724
CA C + I + ++ A +HL CF+C +C+ C+ Y+ + K CE DY+E
Sbjct: 89 CAGCGEAIKGSQALL-ALEKQWHLWCFSCTKCH---CLLSLEYMGMDGKPYCEKDYQE 142
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +2
Query: 512 CKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCE 691
CK DY +G C +C + E++ N +H CFAC C F D+
Sbjct: 7 CKDDYQNQYGKK--CDSCQLYLEG-EIISIHGKN-FHEACFACNSCRQPFPPSDKIIFTG 62
Query: 692 NKILCE 709
LC+
Sbjct: 63 TDYLCQ 68
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 512 CKRDYLRLFGNTGYCAACNKVI 577
C++DY LFG T CAACN I
Sbjct: 136 CEKDYQELFGVT--CAACNGYI 155
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = +2
Query: 548 GYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEYDYEE 724
G CAACNK P V A +H E FAC C F+ + K CE DY +
Sbjct: 280 GMCAACNK--PIIGQVCTALGKTWHPEHFACVACEAPLGT-QNFFERDGKPYCERDYHD 335
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 363 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVG 479
CA C+ I + + ALDQ WH + C C G+ G
Sbjct: 341 CAYCNGPILDS-CVTALDQTWHPEHFVCAECGNPFGDTG 378
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 35.5 bits (78), Expect = 0.044
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 363 CAGCSKVITERYLLKALDQLWHEDCLKCGCCD 458
C CSK + + A+ + WH+ CL C CC+
Sbjct: 10 CPRCSKTVYKAEERLAIGKKWHKSCLTCKCCN 41
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 35.1 bits (77), Expect = 0.058
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 506 NLCKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYL 685
N+C+ Y + C AC+ +I + +H ECF C +C ++ G++F +
Sbjct: 282 NVCQNCYRERYAKR--CGACHNLIEGNTKFVAYDEKYFHRECFTCCKC-NKPLAGEKFRI 338
Query: 686 CENKILC 706
+ + +C
Sbjct: 339 RDGEKIC 345
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEYDYEE 724
C CN+VI V A S YH ECF C C + G F E + +C+ Y E
Sbjct: 237 CVKCNQVIKT-SSVQHAGST-YHSECFTCHHC-DKPLAGSPFTKQEGRNVCQNCYRE 290
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QC 649
CAACN E + +S +H +CF C +C
Sbjct: 176 CAACNGDFAPGEKKVGYQSKTFHDKCFICDEC 207
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 35.1 bits (77), Expect = 0.058
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 363 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTL 488
CA C ++I +A D WH C CDC LG + + +
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVM 184
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 363 CAGCSKVITERYLL--KALDQLWHEDCLKCGCCDCRLG 470
CA CS+ I + + L + WH+DC C C R G
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFG 2068
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEYDYEE 724
C C + P + V+ A +H+E F C +C F G R+Y + CE Y E
Sbjct: 81 CFCCGR--PVEDRVVHALGKAWHVEHFVCAKCEKPF-YGHRYYERKGLAYCETHYNE 134
Score = 31.1 bits (67), Expect = 0.95
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 399 LLKALDQLWHEDCLKCGCCDCRLGEVG 479
++KA+ WH DC +C C+ L + G
Sbjct: 25 VIKAMQANWHPDCFRCEICNDCLADTG 51
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 354 PQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHT 485
P C C K + KA + WH+ CL C C+ RL T
Sbjct: 2 PDKCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLT 45
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 293 RTCFLRNIHGQHLELNTGLPLG*CGTRLSHFMKRRP 186
+ CF R + L+ TG+ + C LS FM+R P
Sbjct: 15 KLCFERKMRAPFLDAQTGIAMNNCNLWLSKFMRREP 50
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 695 YFRINRIDRPHKICGSTVSKRSIPDDKRYCEPS-SPFRTRGSLYYKRHSIQ 546
Y++ +RI P + S + + P + P+ SPF TRG+L K ++I+
Sbjct: 479 YYKSDRISSPCHVTVSEIEEPGAPTSEVMLSPNNSPFLTRGNLKEKDYAIR 529
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCEYDYEE 724
C AC + I + YH +CF C +C + G F E +C+ Y +
Sbjct: 61 CVACRQYIEGTVKFVTRDEGTYHSDCFVCSRC-RKPLAGKTFTEHEGSWVCDDCYHD 116
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILCE 709
C +C K I + V+R ++ +H ECF C C G F + +++ +C+
Sbjct: 2 CNSCFKTITS--SVVRYQNKPHHSECFVCFHC-RTPLAGKTFQMRDDRKVCK 50
>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2142
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = -3
Query: 222 RHSPL-ALHETP-----AQPISLATRN*PLQVPHAGSVLTHTSKDH 103
+HSPL + H+ P +QP A P +PH G +THT+ H
Sbjct: 1416 KHSPLGSRHQPPPSVDMSQPPPPAFAAPPQHLPHLGGAVTHTTTSH 1461
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 345 PP--QPQICAGCSKVITERYLLKALDQLWHED--CLKCGCCDCRLGEVGH 482
PP QPQ C C KV +LK Q HE KC C+ + GH
Sbjct: 254 PPAEQPQTCDICKKVYASARVLKVHVQTVHEGERPHKCKYCEATFTQRGH 303
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 363 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLG 470
CA C ++I +A D+ WH+ C CD LG
Sbjct: 374 CAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLG 409
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 363 CAGCSKVITE-RYLLKALDQLWHEDCLKCGCCDCRLGEVG 479
C C ++I L+ WHE+C +C C +G G
Sbjct: 402 CFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSG 441
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILC 706
C C K I E SN +H ECF C +C R + F +++LC
Sbjct: 522 CEICLKAIVGGEYYTLEESN-FHKECFMCSRC-GRSLASEGFVREGDELLC 570
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +2
Query: 497 RQPNLCKRDYLRLFGNTGYCAACNKVIPAFEMVMRARSNVYHLECFAC*QC 649
R LC Y+ + C AC ++I + + N +H CF C C
Sbjct: 385 RDQILCNNCYVANYQKE--CFACGQMIDSGASRLEYSGNFWHENCFRCANC 433
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 554 CAACNKVIPAFEMVMRARSNVYHLECFAC*QCYHRFCVGDRFYLCENKILC 706
C C K I E SN +H ECF C +C R + F +++LC
Sbjct: 110 CEICLKAIVGGEYYTLEESN-FHKECFMCSRC-GRSLASEGFVREGDELLC 158
>SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9)
Length = 212
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 516 LQRLGWRACIECGQPPRVGSRSSRTSNSPRATVDPKPSRD 397
L+R+G P S S +S+SP+ T+DPK +++
Sbjct: 133 LERVGEAGSSSMDDKPDDSSSPSSSSDSPKGTLDPKETQE 172
>SB_16643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 498 RACIECGQPPRVGSRSSRTSNSPRATVDPKPSRDT 394
R I+ Q P+ GS+SS S++ +AT PK T
Sbjct: 504 RNVIKAFQSPKKGSKSSEESDNHKATNSPKKKSKT 538
>SB_6531| Best HMM Match : EGF_2 (HMM E-Value=0.0016)
Length = 407
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 662 KICGSTVSKRSIPDDKRYCEPSSPFRTRGSLYYKRHSIQ-YCRITSNNLSCRD 507
K+ T+ IP+ K C +SP + G+ Y + H+ + C N C +
Sbjct: 82 KVSEHTIYMEDIPNSKPTCPWTSPCKNGGTCYVENHASKCICPKGYNGKECEN 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,899,104
Number of Sequences: 59808
Number of extensions: 457298
Number of successful extensions: 1245
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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