Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021793
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.33 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.76 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 324  SAFSKSMSPMGNHFPMKTTTGRPIDPRRSD 235
            S  + S +PM    P+ TTT RPI    SD
Sbjct: 2290 STMAPSTTPMVPDKPVTTTTSRPIGTDTSD 2319


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 271 RLHREMVPHRGHRLGKGTPV 330
           +L  ++V H GH+L KG+ V
Sbjct: 384 KLGEDLVTHSGHKLAKGSIV 403


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 271 RLHREMVPHRGHRLGKGTPV 330
           +L  ++V H GH+L K + V
Sbjct: 384 KLGEDLVTHSGHKLAKASIV 403


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 GLVGEPSALLVAQGGVHGAALQIQEE 471
           GLVG   A+ +A+ G H    + +E+
Sbjct: 15  GLVGSLCAIFMAKRGYHVTLFEYRED 40


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 GLVGEPSALLVAQGGVHGAALQIQEE 471
           GLVG   A+ +A+ G H    + +E+
Sbjct: 15  GLVGSLCAIFMAKRGYHVTLFEYRED 40


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 394 GLVGEPSALLVAQGGVHGAALQIQEE 471
           GLVG   A+ +A+ G H    + +E+
Sbjct: 15  GLVGSLCAIFMAKRGYHVTLFEYRED 40


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 187 VPSPKT*ARYLGSDVC 234
           VPSP++  RY G   C
Sbjct: 276 VPSPRSQRRYTGRATC 291


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 241 AAWIDGSARGRLHREMVPHRGHRLGKGTPVPDQTPGSDRAR 363
           + W + SA     R  V H+        PVP  TP  DR R
Sbjct: 145 STWCNYSAYSSASRHHVDHQ--------PVPYLTPADDRGR 177


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = +1

Query: 235 IRAAWIDGSARGRLHREMVPHRGHRLGKGTPVPDQTPGSDRARRLRDRVLS 387
           +RA W +       HR M       L  G  V   T  +     + DRVLS
Sbjct: 247 LRAGWNELLIAAFSHRSMQAQDAIVLATGLTVNKSTAHAVGVGNIYDRVLS 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,364
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)