Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021792
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.67 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.7  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +3

Query: 15  IIFNSFSQNNVNLTLN---QNMSLRETLKELGWHLTEEGIDTITENGQIQDVNILSKKAL 185
           I F S   +  ++TL      +SL +T+++    L  E  +   ENG+    NIL  K L
Sbjct: 293 IAFFSAGNDTTSITLALTCYELSLNKTIQD---RLRHEVTEIYNENGEFTYENILGMKYL 349

Query: 186 D 188
           D
Sbjct: 350 D 350


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 142 FSVIVSMPSSVKCQPSSLRVSRNDMF*FK-VKLTLFC 35
           F ++   P   K +PSSLR   N +  F  V + L+C
Sbjct: 300 FGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYC 336


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 142 FSVIVSMPSSVKCQPSSLRVSRNDMF*FK-VKLTLFC 35
           F ++   P   K +PSSLR   N +  F  V + L+C
Sbjct: 25  FGLVTFTPDRSKFRPSSLRFCLNILSIFTYVPMILYC 61


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 611 HGGGPPSAPMPP 576
           H GGPPS   PP
Sbjct: 64  HYGGPPSGGQPP 75


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 592 EGGPPPWIPFGQRLEALSVDKQFKSLQEAAKQDN 693
           EG P  W+P   +L +  V  +  +LQ   +  N
Sbjct: 487 EGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPN 520


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,462
Number of Sequences: 336
Number of extensions: 3958
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)