Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021792
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.6
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 4.8
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 28 8.5
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = +2
Query: 254 KSPVVVQIQKIRNVSAPKANEE---STSAPRMLKLTLHDGKVTCTGLEISHIPSLSINTP 424
+ P V+Q+ + RNVS P+ EE + A +++L DG + + L + IP ++ +TP
Sbjct: 61 EGPCVLQLLRYRNVSVPRIKEELNQTDPAHSIIRLFFTDGHSSISALLLQSIPGITSDTP 120
Query: 425 PGTKLLL 445
PGTK+L+
Sbjct: 121 PGTKILI 127
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 MGGTVSHMIEKWELNRSLAKHT--RGGIGAEGGPPPWIPFGQRLEALSVDKQFKS 666
+GG V MIEKW + +S + + +G G P WI FG+R + ++K FK+
Sbjct: 148 LGGKVDEMIEKWNVEKSSVRAGGFKSSVGKGTGAPKWISFGKRGQKGQLEKGFKA 202
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 305 KANEESTSAPRMLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLL 445
K N+ R+LKLTL DG+ T +E P LS++ PGTK+L+
Sbjct: 125 KDNDTDQKPSRLLKLTLFDGETTLKAIEFWKCPQLSLHYKPGTKILI 171
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 305 KANEESTSAPRMLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLL 445
K N+ R+LKLTL DG+ T +E P LS++ PGTK+L+
Sbjct: 125 KDNDTDQKPSRLLKLTLFDGETTLKAIEFWKCPQLSLHYKPGTKILI 171
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 634 EALSVDKQFKSLQEAAKQDNPEF-EAQRKGAIAEAQR 741
EAL VDKQ L+ A+ D +F EA K + +AQR
Sbjct: 2147 EALEVDKQLDKLRTASSTDRFDFEEAHNKRDMPDAQR 2183
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 634 EALSVDKQFKSLQEAAKQDNPEF-EAQRKGAIAEAQR 741
EAL VDKQ L+ A+ D +F EA K + +AQR
Sbjct: 2153 EALEVDKQLDKLRTASSTDRFDFEEAHNKRDMPDAQR 2189
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 634 EALSVDKQFKSLQEAAKQDNPEF-EAQRKGAIAEAQR 741
EAL VDKQ L+ A+ D +F EA K + +AQR
Sbjct: 2153 EALEVDKQLDKLRTASSTDRFDFEEAHNKRDMPDAQR 2189
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 634 EALSVDKQFKSLQEAAKQDNPEF-EAQRKGAIAEAQR 741
EAL VDKQ L+ A+ D +F EA K + +AQR
Sbjct: 2153 EALEVDKQLDKLRTASSTDRFDFEEAHNKRDMPDAQR 2189
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 606 TMDSIWTEIRSSFCGQ-TVQESTRSCQTGQSRIRGSKKRCYC*GTE 740
TM ++ S+ G+ TV STRS TG+S + GS + TE
Sbjct: 962 TMTTVGVSTGSTITGESTVSGSTRSTVTGESTVSGSTESTVSGSTE 1007
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 628 RLEALSVDKQFKSLQEAAKQ-DNPEFEAQRKGAIAEAQRMSGVKKV 762
R A+S+D +Q AK+ +N EF+ + K IAE +R K+V
Sbjct: 1231 RTSAVSIDLDKVFVQGTAKKPENDEFDEKIKRGIAEFERSKQEKEV 1276
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 628 RLEALSVDKQFKSLQEAAKQ-DNPEFEAQRKGAIAEAQRMSGVKKV 762
R A+S+D +Q AK+ +N EF+ + K IAE +R K+V
Sbjct: 1231 RTSAVSIDLDKVFVQGTAKKPENDEFDEKIKRGIAEFERSKQEKEV 1276
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 107 FDRRRHRYDNRKWSNSRCKHS*QKSFRLRFERH 205
FD R+ + N KW S+ +H+ +K +++ H
Sbjct: 62 FDNIRYGFKNGKWGPSKVRHATKKEQEIKYFLH 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,779,021
Number of Sequences: 27780
Number of extensions: 376243
Number of successful extensions: 1048
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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