Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021791
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    27   9.9  
U41273-1|AAA82453.1|  516|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 371 RNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSS 252
           R   P++S +  L  + LPP++    +PS + P P A  S
Sbjct: 278 RETQPKKSVKEELPQIPLPPKTEAAASPSPAPPTPKASKS 317


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 371 RNPSPRQSSRASLEYLLLPPRSAPTEAPSGSRPDPSALSS 252
           R   P++S +  L  + LPP++    +PS + P P A  S
Sbjct: 278 RETQPKKSVKEELPQIPLPPKTEAAASPSPAPPTPKASKS 317


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 89  KSESAKECATTHLPKQ-PALKMDGAEAFCLYTTVTGTCDAKFLIWYH*AVTSRTCARRAQ 265
           ++E   +C+ T +    P+        F   TT   TCD             +TCA  AQ
Sbjct: 68  RAEINSDCSATCVRACIPSCSKSTGNTFACSTTCESTCD-------------KTCASAAQ 114

Query: 266 KGLGVSRLEPPSVQILVVVANTP 334
           + +   ++ PP+ Q LV +A  P
Sbjct: 115 QAMSHIQVSPPNPQPLVPIAAAP 137


>Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical
           protein LLC1.3 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 502 TGFPFAQRALFFIIFKNYKKTRHIDI 425
           T  PFA+R  F ++ +NY  T+  D+
Sbjct: 7   TQLPFAKRQFFQVLARNYSNTQDADL 32


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
           protein F47C12.1 protein.
          Length = 1827

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 74  GRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTVTGTCDAKFLI 217
           G W  K  +  + A THLP+    K++  + F         C++ F I
Sbjct: 393 GTWSSKQPNCTKVACTHLPEVANAKIEVPDRFLFGDVARVVCNSGFTI 440


>U41273-1|AAA82453.1|  516|Caenorhabditis elegans Hypothetical
           protein C26B9.5 protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 584 LGYPVEHSFLKTRERLLKRFRCRVPDRNRIPFRSK 480
           LG P EH F++  +R    F    P+ NR     K
Sbjct: 30  LGRPTEHGFVRHGDRFFTNFDTPAPNLNRSTISQK 64


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -3

Query: 696 CSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVP 523
           C++   P+L  I    T+ +RQ   + P+L +A   H       + FK E     T+P
Sbjct: 80  CTTNFTPFLRPITVPVTKGVRQGDPISPNLFSACLEHVFRKLSCIEFKGEAEDYNTIP 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,670
Number of Sequences: 27780
Number of extensions: 360027
Number of successful extensions: 1175
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)