Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021791
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   3.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   3.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   3.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   6.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 112 CNDSPAEATSPENGW 156
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 539 LLKRFRCRVPDRNRIPFR 486
           L+   RC  PD +R PF+
Sbjct: 410 LILNTRCENPDNDRTPFK 427


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 539 LLKRFRCRVPDRNRIPFR 486
           L+   RC  PD +R PF+
Sbjct: 410 LILNTRCENPDNDRTPFK 427


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 539 LLKRFRCRVPDRNRIPFR 486
           L+   RC  PD +R PF+
Sbjct: 410 LILNTRCENPDNDRTPFK 427


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 615 PDLSAASSGHFGLPRRTLVFK 553
           PDL+  S G  GLP   L  +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 684 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 601
           SE   P+   HG R  RQ+ +   D  +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 171 AYTLPLPARVMLNF 212
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 497 SGSYPEPGSGTVSIIVPSSLKTSV 568
           S SYP  GS + S   PSS  +SV
Sbjct: 80  SPSYPGGGSSSPSPSSPSSFFSSV 103


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 275 GVSRLEPPSVQILVVVANTPA 337
           GVS++ P S+  LV    +PA
Sbjct: 385 GVSQVSPVSMSALVSAVRSPA 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,676
Number of Sequences: 438
Number of extensions: 4882
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)