Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021788
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.79 
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    26   1.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.4  
AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    24   4.2  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    24   4.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   5.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +1

Query: 424 QQDADHHKDPDRELSRMEAIQRAREKQQRY*SKHRSAHLKHKKSVKNAREPRGQKHWRST 603
           Q++ +  +  +RE  + E  QR  E++QR   + R A  + ++  +  RE     H    
Sbjct: 487 QREKEQREKEERERQQREKEQR--EREQREKEREREAARERERERERERERERMMHMMPH 544

Query: 604 EPPSPAGSL 630
             P P  S+
Sbjct: 545 SLPRPFFSI 553


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1

Query: 592 WRSTEPPSPAGSL 630
           WRS  P SPAGSL
Sbjct: 83  WRSQNPASPAGSL 95


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 595 RSTEPPSPAGSLVVPMTATFLS 660
           R T+P SP GSL+  +T+  LS
Sbjct: 180 RKTKPNSPLGSLLAAVTSPVLS 201


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +1

Query: 475  EAIQRAREKQQRY*SKHRSAHLKHKKSVKNAREPRGQKHWRSTEPPSPAGSL 630
            E  ++A ++ +R    H    ++ + S+    EP    HWRS    S A +L
Sbjct: 1457 EEREQAEQRFERQ-KNHTKDTIRQQGSLVRWNEPLSVSHWRSKLDESEAATL 1507


>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 421 IQQDADHHKDPDR 459
           IQ+D DH+ DP+R
Sbjct: 36  IQRDPDHYPDPER 48


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 421 IQQDADHHKDPDR 459
           IQ+D DH+ DP+R
Sbjct: 413 IQRDPDHYPDPER 425


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 694 GGRYVEAEAPPLRGR*PSSEPPSF 623
           GGR+    +PP R R  S+ P S+
Sbjct: 265 GGRWPSCRSPPARRRSRSTRPTSW 288


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/49 (18%), Positives = 24/49 (48%)
 Frame = +1

Query: 418 LIQQDADHHKDPDRELSRMEAIQRAREKQQRY*SKHRSAHLKHKKSVKN 564
           ++QQ     + P R+       Q+ R +QQ++  +  +   + ++ ++N
Sbjct: 71  MLQQQQQQQRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLRN 119


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 450 SGSGTVPHGSNPTS*RKTTALLEQA 524
           +G G +P G  PTS   TT+L   A
Sbjct: 584 AGGGAIPEGQEPTS---TTSLTTSA 605


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,150
Number of Sequences: 2352
Number of extensions: 14087
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)