Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021788
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.97
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.97
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.97
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 2.2
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 23 2.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.8
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.8
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKKSVKNAREPRGQ 585
RE + R+RE++Q+ R + S + +R+ RG+
Sbjct: 279 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRGR 321
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.97
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 457 RELSRMEAIQRAREKQQRY*SKHRSAHLKHKK----SVKNAREPRGQKHWRSTEPPSPAG 624
R ++ E ++R RE + + LK K ++ ARE + K +S P S
Sbjct: 28 RSRTQEERLRRRREWMIQQEREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGR 87
Query: 625 SLVVPMTATFLSVEELQ 675
S + TF+ E+L+
Sbjct: 88 SNASNTSKTFILSEKLE 104
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 632 TKLPAGDGGSVLLQCFCPLGSL 567
TKLP G LQC P G L
Sbjct: 591 TKLPMNAGEFANLQCIVPTGDL 612
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 368 NPIAPTTYQPYVARNCNRNVTGLYLA-YCSNMPI 270
N +A + +PY RN R + Y+A Y S++ +
Sbjct: 196 NVLATSLTEPYTLRNYGRRINCTYVALYPSSVQV 229
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 271 MGILEQYAKYNPVTFLLQFLATYGWY 348
+G E Y+K+ PV+ +L FL Y
Sbjct: 50 IGANEHYSKFFPVSEILSFLIEESGY 75
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 324 IPSYVWLVCGRSYWIGGASLQKVEAC 401
IP YV V + W+ GA + C
Sbjct: 80 IPLYVCRVLHTTVWVAGAQRGNEQRC 105
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 589 HWRSTEPPSPAGSLVVPMTATFLSVEELQPPRIDPRRN-RNVPE 717
H + E GSL P+T T +V++L R RRN R P+
Sbjct: 143 HEKLVESFPRGGSLPTPVTPTPTTVQQLL-RRAQIRRNERRTPD 185
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,083
Number of Sequences: 438
Number of extensions: 4240
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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