Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021787
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.85 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.85 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 135 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPR--GMDKMIQAP 257
           Y+   KP +  ++ INA K +  AIR  +GP+     K+I+ P
Sbjct: 493 YRLNHKPFNFHIT-INADKPMKAAIRIFIGPKYDSHHKLIEIP 534


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 135 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPR--GMDKMIQAP 257
           Y+   KP +  ++ INA K +  AIR  +GP+     K+I+ P
Sbjct: 493 YRLNHKPFNFHIT-INADKPMKAAIRIFIGPKYDSHHKLIEIP 534


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 233 NG*DDSSTNG-EVTITNDGATILKQMSVIHPAAKMLVELSRAQDI 364
           NG D  + N  E+ + NDG+  L ++ +IH A        R QD+
Sbjct: 347 NGADLETLNEPEIRVFNDGSLYLTKVQLIH-AGNYTCHAVRNQDV 390


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 550 KHLHYSSPLELTYFDHL*SQLKGFLETI 467
           KH H   P+ ++   HL  +L  F++ +
Sbjct: 542 KHDHQGRPISISKNQHLFVELDQFIQNL 569


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,346
Number of Sequences: 438
Number of extensions: 3583
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)