Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021787
(661 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 116 1e-26
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 105 3e-23
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 96 2e-20
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 95 3e-20
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 93 1e-19
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 87 1e-17
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 80 1e-15
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 79 3e-15
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 79 3e-15
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 78 5e-15
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 48 4e-06
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 48 6e-06
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 47 1e-05
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 47 1e-05
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 47 1e-05
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 41 6e-04
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 40 0.001
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 38 0.004
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 37 0.010
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 35 0.055
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 34 0.073
At5g49770.1 68418.m06164 leucine-rich repeat transmembrane prote... 32 0.29
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 29 2.1
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A... 29 3.6
At1g44780.1 68414.m05130 expressed protein ; expression supporte... 28 6.3
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 116 bits (279), Expect = 1e-26
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 248 SSTNGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 427
S+ NGEV ITNDGATIL +M V+ PAAKMLVELS++QD AGDGTT+VVVIAGALL +
Sbjct: 58 STANGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLKECQ 117
Query: 428 KLLQKGIHPTVISDGFQKALQLALQVV 508
LL GIHPTVISD KA A+ ++
Sbjct: 118 SLLTNGIHPTVISDSLHKACGKAIDIL 144
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/47 (59%), Positives = 42/47 (89%)
Frame = +1
Query: 514 MSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEP 654
M+ PV+L + D+L+K+A+TSLNSKVVSQ+ST+LAP+AV A+ +V++P
Sbjct: 147 MAVPVELTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDP 193
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +3
Query: 87 MAPKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMI 248
MA K G KA S V D + DIR +NIN+A+AV+DA+RTSLGP+GMDKMI
Sbjct: 8 MASKPRGS--KAESFV--DNKRREDIRFANINSARAVSDAVRTSLGPKGMDKMI 57
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 105 bits (251), Expect = 3e-23
Identities = 48/82 (58%), Positives = 68/82 (82%)
Frame = +2
Query: 257 NGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLL 436
+G++TITNDGATIL+QM V + AK++VELSR+QD E GDGTT VVV+AGALL+ AE+ L
Sbjct: 61 DGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQL 120
Query: 437 QKGIHPTVISDGFQKALQLALQ 502
+GIHP I++G++ A ++A++
Sbjct: 121 DRGIHPIRIAEGYEMASRVAVE 142
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 138 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAP 257
K + + D + +NI A KAVA +R+SLGP+GMDKM+Q P
Sbjct: 21 KTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGP 60
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 529 DLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 651
D+NN + L++ T+L+SK+V++ LA IAV+A+ AV +
Sbjct: 154 DVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVAD 194
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = +2
Query: 260 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 439
G + +TNDG IL+++ V HPAAK ++ELSR QD E GDGTTSV+V+AG +L AE L+
Sbjct: 53 GGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLE 112
Query: 440 KGIHPTVISDGFQKALQLALQVV 508
K HPTVI + KAL+ ++ V+
Sbjct: 113 KNYHPTVICRAYIKALEDSIAVL 135
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 174 NINAAKAVADAIRTSLGPRGMDKMI 248
NI A+KAVAD IRT+LGPR M KM+
Sbjct: 24 NIQASKAVADIIRTTLGPRSMLKML 48
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 95.5 bits (227), Expect = 3e-20
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2
Query: 260 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 439
G+VTITNDGATIL+ + V HPAAK+LVEL+ QD E GDGTTSVV++A LL A L++
Sbjct: 53 GDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVR 112
Query: 440 KGIHPTVISDGFQKALQLALQVVK 511
IHPT I G++ A++ + + ++
Sbjct: 113 NKIHPTSIISGYRLAMRESCKYIE 136
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 123 NSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMI 248
N + D+ D+R N+ A +AV++ ++TSLGP G+DKM+
Sbjct: 7 NPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKML 48
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +2
Query: 266 VTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKG 445
VT+TNDGATILK + + +PAAK+LV++S+ QD E GDGTTSVVV+AG LL AEKL+
Sbjct: 56 VTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASK 115
Query: 446 IHPTVISDGFQKALQLA 496
IHP I G++ A + A
Sbjct: 116 IHPMTIIAGYRMASECA 132
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/44 (34%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Frame = +3
Query: 132 VYKD---KSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA 254
++KD + K R+++ A A++D ++++LGP+GMDK++Q+
Sbjct: 6 IFKDDASEEKGERARMASFVGAMAISDLVKSTLGPKGMDKILQS 49
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 550 LLKAAATSLNSKVVSQHSTILAPIAVQAI 636
LLK A T+L SK++SQ A +AV A+
Sbjct: 154 LLKIAMTTLCSKILSQDKEHFAEMAVDAV 182
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/84 (45%), Positives = 60/84 (71%)
Frame = +2
Query: 260 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 439
G VTI+NDGATI+K + ++HPAAK+LV+++++QD E GDGTT+VV++A L A+ ++
Sbjct: 57 GSVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIE 116
Query: 440 KGIHPTVISDGFQKALQLALQVVK 511
G+H + ++ A LA+ VK
Sbjct: 117 DGVHAQNLIRSYRTASTLAIAKVK 140
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 168 LSNINAAKAVADAIRTSLGPRGMDKMI 248
+SNINA AV D +RT+LGPRGMDK+I
Sbjct: 26 VSNINACTAVGDVVRTTLGPRGMDKLI 52
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/80 (42%), Positives = 56/80 (70%)
Frame = +2
Query: 272 ITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIH 451
+TND ATI+ ++ + HPAAK+LV ++AQ E GDG + AG LL +AE+L++ G+H
Sbjct: 65 VTNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLH 124
Query: 452 PTVISDGFQKALQLALQVVK 511
P+ I G+ KA+ A+++++
Sbjct: 125 PSEIISGYTKAVSKAVEILE 144
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 135 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAPMEKL 269
Y+ S + + NI A K ++ RTSLGP GM+KM+ ++KL
Sbjct: 19 YRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKL 63
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +2
Query: 257 NGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLL 436
+G++ +T DG T+LK+M + +P A M+ + AQD +GDGTTS V+ G L+ +E+ +
Sbjct: 50 SGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCI 109
Query: 437 QKGIHPTVISDGFQKALQLALQ 502
+G+HP V+ DGF+ A + LQ
Sbjct: 110 DEGMHPRVLVDGFEIAKRATLQ 131
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 177 INAAKAVADAIRTSLGPRGMDKMI 248
INAAK + D ++++LGP+G KM+
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKML 46
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +2
Query: 257 NGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLL 436
+G++ +T DG T+LK+M + +P A M+ + AQD +GDGTTS V+ G L+ +E+ +
Sbjct: 50 SGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCI 109
Query: 437 QKGIHPTVISDGFQKALQLALQ 502
+G+HP V+ DGF+ A + LQ
Sbjct: 110 DEGMHPRVLVDGFEIAKRATLQ 131
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 177 INAAKAVADAIRTSLGPRGMDKMI 248
INAAK + D ++++LGP+G KM+
Sbjct: 23 INAAKGLQDVLKSNLGPKGTIKML 46
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/66 (54%), Positives = 52/66 (78%)
Frame = +2
Query: 305 MSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKA 484
M V + AK++VELSR+QD E GDGTT VVV+AGALL+ AE+ L +GIHP I++G++ A
Sbjct: 1 MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 60
Query: 485 LQLALQ 502
++A++
Sbjct: 61 SRVAVE 66
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 529 DLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 651
D+NN + L++ T+L+SK+V++ LA IAV+A+ AV +
Sbjct: 78 DVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVAD 118
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +2
Query: 251 STNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLD 418
S G I NDG T+ +++ + P AK++ + + + AGDGTT+ VV+A L+
Sbjct: 93 SKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIA 152
Query: 419 SAEKLLQKGIHPTVISDGFQKALQLALQVVK 511
K++ G +P +I+ G +K + + +K
Sbjct: 153 EGVKVVAAGANPVLITRGIEKTTKALVAELK 183
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +2
Query: 251 STNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLD 418
S G I NDG T+ +++ + P AK++ + + + AGDGTT+ VV+A +
Sbjct: 93 SKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIA 152
Query: 419 SAEKLLQKGIHPTVISDGFQKALQLALQVVKI 514
K++ G +P +I+ G +K + + +K+
Sbjct: 153 EGVKVVAAGANPVLITRGIEKTAKALVNELKL 184
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +2
Query: 251 STNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLD 418
S G I NDG T+ +++ + P AK++ + + + AGDGTT+ VV+A +
Sbjct: 97 SKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIA 156
Query: 419 SAEKLLQKGIHPTVISDGFQKALQLALQVVK 511
K++ G +P +I+ G +K + + +K
Sbjct: 157 EGVKVVAAGANPVLITRGIEKTAKALVTELK 187
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +2
Query: 251 STNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLD 418
S G I NDG T+ +++ + P AK++ + + + AGDGTT+ VV+A +
Sbjct: 97 SKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIA 156
Query: 419 SAEKLLQKGIHPTVISDGFQKALQLALQVVK 511
K++ G +P +I+ G +K + + +K
Sbjct: 157 EGVKVVAAGANPVLITRGIEKTAKALVTELK 187
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 260 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIE----AGDGTTSVVVIAGALLDSAE 427
G I NDG T+LK++ + P + V+L R + AGDG+T+ +++A L+
Sbjct: 84 GPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGI 143
Query: 428 KLLQKGIHPTVISDGFQKALQLALQVVK 511
K++ G +P ++ G +K + + +K
Sbjct: 144 KVISAGTNPIQVARGIEKTTKALVLELK 171
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/87 (21%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +2
Query: 266 VTITNDGATILKQM----SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 433
+ + NDG TI K + ++ + A ++ E++ + AGDGTT+ +++A ++ +
Sbjct: 78 IKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMNESAGDGTTTAIILAREMIKAGSLA 137
Query: 434 LQKGIHPTVISDGFQKALQLALQVVKI 514
+ G + + +G K ++ ++V+++
Sbjct: 138 IAFGANAVSVKNGMNKTVKELVRVLQM 164
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 138 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDK 242
K + K D + +NI+A KAVA +R+SLGP+GM+K
Sbjct: 21 KTRLKGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2
Query: 251 STNGEVTITNDGATILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLD 418
S+ G IT DG T+ K +S A A+++ +++ A + AGDGTT V+ A+L
Sbjct: 72 SSYGGPKITKDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILI 131
Query: 419 SAEKLLQKGIHPTVISDGFQKALQLALQVVK 511
K + G++ + G A+ + +K
Sbjct: 132 EGCKSVAAGVNVMDLRVGINMAIAAVVSDLK 162
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 260 GEVTITNDGATILKQM----SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 427
G + NDG TI + + ++ + A ++ E++ + AGDGTT+ ++A ++
Sbjct: 89 GSPKVVNDGVTIARAIELPNAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGL 148
Query: 428 KLLQKGIHPTVISDGFQKALQ 490
+ G +P + G K +Q
Sbjct: 149 LSVTSGANPVSLKRGIDKTVQ 169
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 34.7 bits (76), Expect = 0.055
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +2
Query: 260 GEVTITNDGATILKQMS----VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 427
G +T DG T+ K + + + A ++ +++ A + AGDGTT V+ A+
Sbjct: 75 GAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGC 134
Query: 428 KLLQKGIHPTVISDGFQKALQLALQVVK 511
K + G++ + G A+ + +K
Sbjct: 135 KSVAAGMNAMDLRRGISMAVDAVVTNLK 162
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 34.3 bits (75), Expect = 0.073
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 260 GEVTITNDGATILKQMS----VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAE 427
G +T DG T+ K + + + A ++ +++ A + AGDGTT V+ A+
Sbjct: 76 GAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGC 135
Query: 428 KLLQKGIHPTVISDGFQKAL 487
K + G++ + G + A+
Sbjct: 136 KSVAAGMNAMDLRRGIKLAV 155
>At5g49770.1 68418.m06164 leucine-rich repeat transmembrane protein
kinase, putative
Length = 946
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 558 GSCNITKFQSSFTTLNYFGTHCSASNSSSNGTYC 659
G CN + S+F+TL G HC + G +C
Sbjct: 407 GYCNAVQPNSTFSTLTKCGNHCGKGKEPNQGCHC 440
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 302 QMSVIHPAAKMLVELS--RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGF 475
Q SV AA +++E +A+ ++ T ++LDS EK+ Q+GI + +
Sbjct: 113 QQSVSQHAANLVLEAIYLKAKSLQKLGRITEAAHECKSVLDSVEKIFQQGIPDAQVDNKL 172
Query: 476 QKALQLALQVV 508
Q+ + A++++
Sbjct: 173 QETVSHAVELL 183
>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
(PP2A) 65 kDa regulatory subunit, putative similar to
protein phosphatase 2A 65 kDa regulatory subunit
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 405 PAITTTDVVPSPASIS*ARDNSTNIFAAG*ITLICFKIVAPSLVI 271
P T TD+VP+ A + + I AAG +T C +I+ P L I
Sbjct: 274 PEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTKFC-RILNPELAI 317
>At1g44780.1 68414.m05130 expressed protein ; expression supported
by MPSS
Length = 471
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 138 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAPMEKLQ*LMMEQ 290
K K TD+ + K+V + S+ P K QAP EK + +++E+
Sbjct: 303 KTKETATDVYGKRVEHLKSVIKSCGMSVPPNIYKKAKQAPQEKREAMLIEE 353
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,566
Number of Sequences: 28952
Number of extensions: 248148
Number of successful extensions: 664
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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