Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021786
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I4R5 Cluster: Putative uncharacterized protein; n=1; ...    40   0.069
UniRef50_Q4W9E7 Cluster: Mitochondrial chaperone ATPase (Bcs1), ...    35   1.5  
UniRef50_A0ED71 Cluster: Chromosome undetermined scaffold_9, who...    35   2.0  

>UniRef50_Q8I4R5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2215

 Score = 39.5 bits (88), Expect = 0.069
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 285 VLF*NYYLKIWYHSNY*I-----KTNFFQYYTILRHKTFKYIIRSTYSGNRGDQSKKLLP 449
           +L+  ++L +++H N  +     +TNFF Y TIL  K  K I++      R    +K   
Sbjct: 90  LLYRGFHLNVYFHKNVAMYESFSRTNFFFYLTILNKKNVKKIVKIISKAERSSNKRKFNV 149

Query: 450 IKRYL 464
            K+YL
Sbjct: 150 FKKYL 154


>UniRef50_Q4W9E7 Cluster: Mitochondrial chaperone ATPase (Bcs1),
           putative; n=3; Trichocomaceae|Rep: Mitochondrial
           chaperone ATPase (Bcs1), putative - Aspergillus
           fumigatus (Sartorya fumigata)
          Length = 520

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +3

Query: 90  RPNRVNIKLDYRFVSLKIVSTIFRSLSQTYWPRDTKS 200
           RP RV+ KL+++  S  + +T+FR++ Q Y P +  S
Sbjct: 375 RPGRVDYKLEFQLASRDLCATMFRNIFQVYTPSEVGS 411


>UniRef50_A0ED71 Cluster: Chromosome undetermined scaffold_9, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_9,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 3059

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = +3

Query: 150 TIFRSLSQTYWPRDTKSICLSFGTDI----DFIEFLEYGTKL*TLQPKAVLF*NYYLKIW 317
           TI  S  Q  WP    +I L+FG  +      I F+E GTK+     K VL+    + I 
Sbjct: 155 TILHSYLQIKWPFYDNNILLTFGGSMIVGQSKISFIEQGTKISYFPGKIVLYEFEIVDIS 214

Query: 318 YHSNY-*IKTNFFQYY 362
           +  NY  I+  FF+ Y
Sbjct: 215 FSENYQQIQQAFFELY 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,060,400
Number of Sequences: 1657284
Number of extensions: 11001742
Number of successful extensions: 20298
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20295
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)